Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06508 ATGGTGAGGACTCCTTGTTGTGAGAAGATGGGTTTGAAGAAGGGACCTTGGACACCTGAAGAAGATCAAATATTGATTTCTCATATTCAACAATATGGCCATGGAAACTGGCGCGCCCTTCCAAAACAAGCTGGTTTGTTAAGGTGTGGTAAGAGTTGTAGGCTTCGTTGGATCAATTACCTGAGGCCAGATATTAAACGAGGGAAGTTCAGCAAGGAAGAAGTAGAGACCATCCTCAAACTGCATGAAGTTCTTGGAAATAGATGGTCTGCTATTGCTGCAAGATTACCAGGACGAACGGACAATGAAGTAAAGAATTTTTGGCATACTCATCTGAAGAGGCGTGAGAGAAGTCAAGTGCATAGTACTACCAATATCAATAACTCCTCTTATCCCTTGCAAGAGGCACAAGCAACTTCTACTTCAGGGGCTTCAATAAATATGTCACGAGTAGATGTGGATGCATCAGGTGCGCCTATAACTTCTAGTCTCACTGGGAAGGTTTTGGTTGCCAATGATCATAGTTTACCTTCAAGGGGAAATCCACCTATTGTAGATCTAGGATATTATGGTGTGGTGTCTTCTTCTGATCATATTTCAGGAGAAACAATGAGCAGTAACGTTCACAATGAGATGGGTGAAGAAATGGAATTTTGGTATGATCTTTTCATTAGGGGTCATCACAGGGGCATGGAAGTATAA 702 0.4202 MVRTPCCEKMGLKKGPWTPEEDQILISHIQQYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGKFSKEEVETILKLHEVLGNRWSAIAARLPGRTDNEVKNFWHTHLKRRERSQVHSTTNINNSSYPLQEAQATSTSGASINMSRVDVDASGAPITSSLTGKVLVANDHSLPSRGNPPIVDLGYYGVVSSSDHISGETMSSNVHNEMGEEMEFWYDLFIRGHHRGMEV. 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06508 233 CDD SANT 69 112 IPR001005 -
Seca7g06508 233 CDD SANT 16 61 IPR001005 -
Seca7g06508 233 SMART sant 66 114 IPR001005 -
Seca7g06508 233 SMART sant 13 63 IPR001005 -
Seca7g06508 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Seca7g06508 233 Gene3D - 13 66 - -
Seca7g06508 233 Gene3D - 69 131 - -
Seca7g06508 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Seca7g06508 233 FunFam MYB-related transcription factor 13 66 - -
Seca7g06508 233 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Seca7g06508 233 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 162 - -
Seca7g06508 233 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Seca7g06508 233 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Seca7g06508 233 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Seca7g06508 233 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06508 Seca-Chr7 166756485 166758020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06508 1 223 MYB Transcription Factor Family AT2G31180 48.148 8.65e-72 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Seca7g06508 Myb_DNA-binding 4.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06508 K09422 - gmx:102663040 284.648