Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06504 ATGAGGATTATGATCAAAGGCGGTGTTTGGAAAAACACCGAAGATGAAATCCTGAAAGCTGCTGTTATGAAATATGGTAAGAATCAGTGGGCTCGAATCTCTTCCCTCCTCGTTCGCAAATCCGCCAAGCAATGCAAGGCTCGCTGGTACGAGTGGCTCGATCCTTCCATTAAGAAGACTGAGTGGACTAGAGAAGAGGATGAGAAACTGCTTCATCTTGCTAAGCTTATGCCTACACAGTGGAGAACAATTGCTCCCATTGTAGGTCGTACTCCTTCCCAATGCCTTGAGAGGTATGAGAAGCTCCTTGATGCAGCTTGTGTAAAGGATGACAACTATGAACCTGGTGATGATCCTCGTAAATTGCGCCCTGGGGAGATTGATCCAAACCCAGAGTCAAAACCTGCACGCCCAGATCCTGTTGATATGGATGAAGATGAAAAGGAGATGCTTTCTGAAGCACGAGCCCGGTTAGCCAATACAAAGGGCAAGAAAGCAAAAAGGAAAGCCAGGGAGAAACAGCTTGAGGAAGCCAGGAGGCTTGCCTCTTTACAAAAAAAGAGGGAGCTCAAGGCTGCTGGAATTGATATCAGGCACCGGAAGAGGAAAAGGAAAGGGATAGATTACAATGCAGAGATTCCATTTGAGAAGAGGCCCCCTCCAGGGTATTTTGATGTTGCTGGTGAAGATAGACCAGTGGAACAGCCCAAGTTCCCTATTACAATTGAAGAACTCGAGGGAAAAAGGAGGGTTGATGTTGAGGCACACTTGAGAAAGCATGACGTTGCAAAAAATAAAATTGCACAAAGGCAAGATGCACCGTCTGCTATACTGCATGCCAACCAACTAAATGACCCAGAAGCAGTAAGAAAGAAGTCTAAACTGATGCTTCCGCCACCCCAGATTTCTGATCAGGAATTGGATGAAATTGCAAGGTTGGGTTATGCCAGTGACCTTGCAGGGAGTGAGGAACTTGCAGAAGGTAGTGGCGCAACACGTGCTCTTCTGGCTAATTATGCACAAACACCTGGCCGAGGAATGACTCCTTTACGAACCCCTCAGAGAACACCAGCTGGTAAAGGAGATGCCATCATGATGGAAGCTGAAAATCTGGCCAGGTTGAGGGAGTCTCAGACACCATTGTTAGGAGGAGAGAACCCAGAGTTGCATCCTTCAGATTTTTCTGGGGTCACTCCTAAGAAAAAGGAGATTCAGACTCCAAATCCAATGCTGACTCCCTCTGCAAGCCCTGGAGGTGCAGGTCTCACTCCCAGAACTGGCATGACACCAGCAAGAAATGGTCCTTCTTTAAGCATGACGCCAAAGGGAACTCCTCTGAGGGATGAGCTACATATTAATGAGGACATGGATATGCATGACAGTGCTAAACTTGAGCTACAGAGACAGGCTGAGATGAGAAGAAGTTTGCGCACTGGATTAGGAAGCCTTCCACAGCCCAAAAATGAGTACCAGATAGTGATGCAACCAGTTCCAGAAGATGCTGAAGAGCCTGAGGAGAAGATTGAAGAGGATATGTCTGATAGAATAGCTAGAGAAAAGGCAGAAGAAGAGGCACGGCAGCAGGCATTACTTAGAAAACGATCAAAAGTCCTTCAAAGGGAACTTCCTAGGCCTCCTGCTGCATCATTGGAGCTTATAAGAAATTCCTTGATGAGAGCTGATGGGGACAAGAGTTCCTTTGTTCCACCAACCTCTATTGAGCAAGCTGATGAGATGATTAGAAGGGAGCTTCTAACTTTGCTGGAGCATGACAATGCTAAGTATCCACTTGATGAGAATGTGAGTAAGGAGAAAAAGAAACGAACCAAGCGTGCGGTTAATGGGTCTGCTGTCCCTATTATAGAAGATTTTGAAGAAGATGAGATGAAAGATGCTGATAAATTGATAAAGGAAGAGGCCCAGTATCTTTGTGTAGCGATGGGGCATGAAAGTGAACCTCTTGATGAATTTATTGAAGCACATAAAACTTGCCTTAATGATCTCATGTACTTTCCCACTCGTAGTGCCTTTGGTCTCTCAAGTGTTGCTGGGAACATGGAAAAGCTAGCATCTTTGCAGAATGAATTTGAAAATGTGAGAAGCAAGTTGGATGATGGTAAGGAGAAGATAGTACGGCTTGAGAAGAAGGTTATGGTTTTAACGCAAGGCTATGAGACGAGATTAAAAAAAAGCCTTTGGCCGCAAATTGAGGCTACTTTCAAGCAGATGAACATAGCTGCAACAGAATTAGAATGCTTTGAAGTTTTGAAAAAGCAGGAGCAATTGGCAGCATCACACAGGATAAACAATCTGTGGGCTGAAGTACAAAAGCAAAAGGAACTTGAGAAAACTTTGCAAAATAAGTATGGGAATTTAACTGAAGAGCTGGAAAAGATACAAAATATCATGGATCAATACAGGGCACAAGCACAACAGCAAGAAAAAATTAAAGCAAGCAGTCGTGTTCAGGAACCAACTGAGGTCACAGCTGATGAAACTGATGTACAGGGTACAGAGAATTGTAAAGATGTGCCTCACTCCATAGAACATGGAAATGCTATGGCAGATGATCCAGCTAATGATGGAACTGCTGACCAGCAAGTAGATATTGTGCAAGGTCAGGCTACTTCTAGCCCCAAAAATGACAGATGTGGATTCTGA 2661 0.4457 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDDNYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRHRKRKRKGIDYNAEIPFEKRPPPGYFDVAGEDRPVEQPKFPITIEELEGKRRVDVEAHLRKHDVAKNKIAQRQDAPSAILHANQLNDPEAVRKKSKLMLPPPQISDQELDEIARLGYASDLAGSEELAEGSGATRALLANYAQTPGRGMTPLRTPQRTPAGKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKKKEIQTPNPMLTPSASPGGAGLTPRTGMTPARNGPSLSMTPKGTPLRDELHINEDMDMHDSAKLELQRQAEMRRSLRTGLGSLPQPKNEYQIVMQPVPEDAEEPEEKIEEDMSDRIAREKAEEEARQQALLRKRSKVLQRELPRPPAASLELIRNSLMRADGDKSSFVPPTSIEQADEMIRRELLTLLEHDNAKYPLDENVSKEKKKRTKRAVNGSAVPIIEDFEEDEMKDADKLIKEEAQYLCVAMGHESEPLDEFIEAHKTCLNDLMYFPTRSAFGLSSVAGNMEKLASLQNEFENVRSKLDDGKEKIVRLEKKVMVLTQGYETRLKKSLWPQIEATFKQMNIAATELECFEVLKKQEQLAASHRINNLWAEVQKQKELEKTLQNKYGNLTEELEKIQNIMDQYRAQAQQQEKIKASSRVQEPTEVTADETDVQGTENCKDVPHSIEHGNAMADDPANDGTADQQVDIVQGQATSSPKNDRCGF. 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06504 886 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 803 IPR047242 GO:0000398|GO:0000974
Seca7g06504 886 MobiDBLite consensus disorder prediction 110 149 - -
Seca7g06504 886 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Seca7g06504 886 MobiDBLite consensus disorder prediction 814 835 - -
Seca7g06504 886 Coils Coil 167 187 - -
Seca7g06504 886 SMART sant 58 105 IPR001005 -
Seca7g06504 886 SMART sant 6 55 IPR001005 -
Seca7g06504 886 Gene3D - 5 58 - -
Seca7g06504 886 MobiDBLite consensus disorder prediction 865 886 - -
Seca7g06504 886 Pfam pre-mRNA splicing factor component 406 654 IPR021786 -
Seca7g06504 886 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Seca7g06504 886 FunFam CDC5 cell division cycle 5-like 60 120 - -
Seca7g06504 886 Gene3D - 59 114 - -
Seca7g06504 886 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
Seca7g06504 886 MobiDBLite consensus disorder prediction 836 850 - -
Seca7g06504 886 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Seca7g06504 886 Coils Coil 775 816 - -
Seca7g06504 886 CDD SANT_CDC5_II 55 106 IPR047240 -
Seca7g06504 886 MobiDBLite consensus disorder prediction 399 413 - -
Seca7g06504 886 FunFam CDC5 cell division cycle 5-like 5 59 - -
Seca7g06504 886 MobiDBLite consensus disorder prediction 814 886 - -
Seca7g06504 886 MobiDBLite consensus disorder prediction 380 445 - -
Seca7g06504 886 Coils Coil 689 716 - -
Seca7g06504 886 CDD SANT 10 53 IPR001005 -
Seca7g06504 886 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Seca7g06504 886 Pfam Myb-like DNA-binding domain 10 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06504 Seca-Chr7 166727114 166732931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06504 1 835 MYB-Related Transcription Factor Family AT1G09770 75.986 0.0 1249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Seca7g06504 Myb_Cef 1.1e-60 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06504 K12860 - gmx:100801352 1531.54