Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06494 ATGTGCGAAGCCCTAAAGAGTCAATACCAGTTGTGCGAGGAAATCGGTCGCGGCCGTTTCGGCACCATCTTCCGCTGCTTCAACCCTATTTCCAACCACTCCTTCGCCTGCAAAGTCATCGACAAATCTCTCCTCGCCGATTCCACCGATCGTGAATGCCTCGAAAACGAACCCAAATACATGTCCCTCCTTTCACCACACCCTAACATCCTTCAAATTTTTGATGTTTTTGAAAACGACGACGTTTTATCCATCGTCCTTGAGCTCTGCAAGCCTCTAACCCTTCTCGACCGCATCGTCGCTAACCCTAACCCTCTTTCCGAGCCTCAAGCCGCTTCCCTTATAAAGCAGCTTCTAGAAGCCGTCGCACACTGCCACCGCCTCGGCGTGGCGCACCGTGATATCAAGCCTGATAATATTCTCTTTGACTCTGCTGATAATCTGAAACTCGCTGATTTTGGTTCTGCTGAGTGGTTCGGCGACGGGAGGAGCATGAACGGAGTGGTTGGAACGCCGTATTACGTGGCGCCGGAGGTTCTGATGGGAAGGGATTATAACGAGAAGGTTGATGTTTGGAGTTGTGGTGTGTTATTGTACATAATGTTGGCTGGAATTCCACCGTTTTATGGAGATTCTGCGGTTGAGATTTTTGAAGCTGTTGTTAGGGCTAATCTAAGGTTTCCTTCTAGAATCTTCCGATCTGTTTCCCCTGCTGCTAAGGATCTCTTGCGGAAGATGATCTGCAGGGACAGTTCCACGAGAATATCCGCAGAGCAAGCCTTGAGACACCCTTGGATCTTGAGTGGTGGAGACATGGCTAATGTGAATTGA 831 0.4934 MCEALKSQYQLCEEIGRGRFGTIFRCFNPISNHSFACKVIDKSLLADSTDRECLENEPKYMSLLSPHPNILQIFDVFENDDVLSIVLELCKPLTLLDRIVANPNPLSEPQAASLIKQLLEAVAHCHRLGVAHRDIKPDNILFDSADNLKLADFGSAEWFGDGRSMNGVVGTPYYVAPEVLMGRDYNEKVDVWSCGVLLYIMLAGIPPFYGDSAVEIFEAVVRANLRFPSRIFRSVSPAAKDLLRKMICRDSSTRISAEQALRHPWILSGGDMANVN. 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06494 276 PANTHER SERINE/THREONINE-PROTEIN KINASE 5 267 - -
Seca7g06494 276 SMART serkin_6 9 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g06494 276 FunFam Phosphoenolpyruvate carboxylase kinase 2 1 276 - -
Seca7g06494 276 Gene3D Phosphorylase Kinase; domain 1 1 91 - -
Seca7g06494 276 CDD STKc_CAMK 8 265 - -
Seca7g06494 276 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Seca7g06494 276 FunFam Phosphoenolpyruvate carboxylase kinase 1 1 91 - -
Seca7g06494 276 ProSiteProfiles Protein kinase domain profile. 9 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g06494 276 Pfam Protein kinase domain 9 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g06494 276 SUPERFAMILY Protein kinase-like (PK-like) 7 268 IPR011009 -
Seca7g06494 276 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Seca7g06494 276 Gene3D Transferase(Phosphotransferase) domain 1 94 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06494 Seca-Chr7 166519546 166521006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06494 3 274 EF-hand Containing Proteins AT1G50700 40.364 3.75e-73 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Seca7g06494 Pkinase 3.4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06494 - K08794 gmx:548089 469.544