Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06448 ATGGAAGACAAAAAGAATAACGACACGAACATTGGAGAGTTTTCGGCTTTCTCTGCCAAACGGAGAACTAATAATGGGAGAATCAATTTCGATTTGAATGAAGAGCCTCCTCCTTCTCCTATACATATCATGCTTCCTAATTCTCACTCTCAGTTCGTTCTCATCACGTACACTCTCTCATTTACTGTGCCATGGAAGACAAAGTATAACGACACCAACAATGGTGACTTTGCTGCCGAACGGAGAACTAATAACGGGAGAATCGATTTCGATTTGAATGAAGAGCCTCCTTCTTCTCCTATCCATATCATGCTTCCTAATTCTCACTCTCAGGTTTCTGCTAATGGTTGCCACATGGCAACGAGAGGGTTTATGGACCTGGATGAACCTAATCATGAATTTTCATCCTCCACTGAAGGAGATGCTACAAAAGATAGCGATGAACACAGTGGTGCGAAAGTGGTGAAGGATGCAACTATTGATGTTGGTAATAATAAGGGTAAGGGTAAGATGCCAATGTGTTGTTGTGAGTCAGGAGAAAAGGATGCAACAAACAACATAGAATCGAAGGGTAATGGTTGGGAAGTGACACCCTCTGAATTTTCTATTGTGAATGTGAATGAGGTCTCTAATACTCCTCCTTTATCAACTGATGGTGGCAATTTCAAAACTCTGTGTTCGTTTGATGAGGTGGAGGTCATTCCAGATTCTTCTTTTACACCTGCTGGCCAACATTGTGATGAAGAAGGTAACGGAGTTACTGAAGGAAACATATCACTTCAAGATGAGGAGAATGTTGTTGCTGATACTGCTGATGATGAGGAGTCTAAAAGGAAGAGGAAGAGAGAGAGCAACCTTGTGATGAAATACAACAAGAGGCCGAGGAGGAAGATTGATCAAAGAGTAGTAGTCCAACTTGAGAGCCGCATGGACATACTGGATGATGGTTATCGCTGGCATAAGAGCTACTACAGGTGCTCGAATAATGGATGTAGTGCAAGGAAACAGGTGCAAAGGGATGTAAATAATTCAAGATGTGTAAAAACAACATATGATGGAAGGCATAATCATGGAGTGCCAAGCAACGCAAGAATCATTAACCCACCCATAATTAAGCCAAAACCCCAAACTATTAGGGAAGAGATTGAAGCTGCTAATGTGATGGTCACTTTTGCAATACCACCTGGGACTACTGCAAGGCTGCCTAGGCCTACACAAACTTCTCCTCCACCTCATCCTAATCACAACACATTTCTGAGGCGCAATTTGGTTGAAAATATCAATTATAATCATCATGGTGATGGATCTTCTTCCTCTGCATACCAAATGCTCCATTCTTATCGTGGTTCCAATGAAGGAGGGTTGAATCCTAATAACCGTTATTGTAATAGTAATGCCCCTTTGCAAGGTGGATTCGGTCCCTCATCAATGCTTCCTGGTTTTCGTCCATTTAATTATATTCCACCCGATCAACAGGGTAGAGTTCATAACAATGGGACTGGTTCAGTTTTTCCCTTTAGAGCAAAACCTGCTGAAGGTGATCACTGGAATGGATGA 1557 0.42 MEDKKNNDTNIGEFSAFSAKRRTNNGRINFDLNEEPPPSPIHIMLPNSHSQFVLITYTLSFTVPWKTKYNDTNNGDFAAERRTNNGRIDFDLNEEPPSSPIHIMLPNSHSQVSANGCHMATRGFMDLDEPNHEFSSSTEGDATKDSDEHSGAKVVKDATIDVGNNKGKGKMPMCCCESGEKDATNNIESKGNGWEVTPSEFSIVNVNEVSNTPPLSTDGGNFKTLCSFDEVEVIPDSSFTPAGQHCDEEGNGVTEGNISLQDEENVVADTADDEESKRKRKRESNLVMKYNKRPRRKIDQRVVVQLESRMDILDDGYRWHKSYYRCSNNGCSARKQVQRDVNNSRCVKTTYDGRHNHGVPSNARIINPPIIKPKPQTIREEIEAANVMVTFAIPPGTTARLPRPTQTSPPPHPNHNTFLRRNLVENINYNHHGDGSSSSAYQMLHSYRGSNEGGLNPNNRYCNSNAPLQGGFGPSSMLPGFRPFNYIPPDQQGRVHNNGTGSVFPFRAKPAEGDHWNG. 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06448 518 MobiDBLite consensus disorder prediction 240 282 - -
Seca7g06448 518 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 183 397 IPR044810 GO:0003700
Seca7g06448 518 Pfam WRKY DNA -binding domain 320 357 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g06448 518 Gene3D WRKY domain 298 361 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca7g06448 518 MobiDBLite consensus disorder prediction 128 155 - -
Seca7g06448 518 ProSiteProfiles WRKY domain profile. 308 360 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g06448 518 SMART WRKY_cls 313 359 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g06448 518 SUPERFAMILY WRKY DNA-binding domain 307 360 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca7g06448 518 MobiDBLite consensus disorder prediction 128 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06448 Seca-Chr7 165999324 166006040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06448 219 361 WRKY Transcription Factor Family AT5G56270 35.256 4.05e-18 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca7g06448 WRKY 1.4e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06448 K18835 - mof:131154508 126.331