Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06447 ATGTTTCACATATCCCTTCTCAATGTGCTTTCAATTTGGGAAACAACAGAGCACATCTTTCCATTATTTAAACTCAGTCCACTGTTGGATTCCCTGCAAATTAACAGGAATTGTGAAATTTTGTGTAGTGCACTGGCAGTAAAGAATCTCGGTGACACAACCTACAATAACTTCCTAGATCACACTTACCTTTCCGACCATGAGACAACCATTCGTGAGTACTTGGAGACAACAGGTTCTGGAATTATGGAAGAGGAGCTCCCAGAATCCCTCAAATATGTAAACGTTGATGGGAAGAACCTGTTCTACTACTTCGTAAGTTCCGAAAGAAATCCATGGAAGGATCCAGTTGTTCTATGGTTGAATGGGGGACCTGGCTGCTCTAGCTTTGATGGCTTCGTTTATGAGCATGGGCCATTTAACTTTGAGGCAGCGAAAAAACCAGGGAGTCTGCCCACTTTGCATCTCAATCAGTACAGCTGGTCTAAGGTTTCCAACGTTATTTATTTGGATTCTCCCACGGGGGTTGGCCTTTCTTACTCCAACAACTCCACCAAATACCATACGGGGGACCGACAAACTGCATCTGATACCCATGTTTTCCTCTTAAAGTGGTTTTCTCAGTTCCCTGAATTCATTGATAATCCATTTTATATTTCTGGGGAATCTTATGCTGGAGTATTTGTGCCTACTCTAGCTCATGCAATAGTTAAAGGAATCAAGCATGGTGCTAAATCGGTGATCAATTTTAAGGGTTACCTGATTGGAAATGGTGCGACGGACAAAAGGTTTGACGGCAATGCTCTCATCCCATTTGTACATGGAATGGGTCTCATATCAGACGATATCTATGAGGATGTAAAAGCTGCTTGCAAAGGAAAGTACTACGATTCTAAATACGCTGCGTGCACAAAGAACCTCGACAAAGTTTACAAGATTCTTGAGGGGCTTAACGTGTACTATACAATAGATTCATGTTACCATGACCCTCCTGCTACTGCTGCTGCCGCCGCCAAAGGAAATGGAAGCTTGCCATTGAGTTTCCAGCAATTAGGAACTACCGATAAGGCTCTTCCTACTGATCAAGTAGCAACTTCATGGCTAAACAACGAAGAAGTTAGGAAAGCCATTCATGCTGAGAAGATAAGTGTGGCGGGTCCGTGGGAATTATGCACTGGCAGGATAAATTACACTTTCGATGTTGGAAGCAATATGATTCCTTACCACAAGAAACTAACCAAGGAGCTGGGCTATCGAGCACTTATTTTCAGTGGCGACCATGATATGTGTGTGCCATTTACGGGAAGTGAGGCGTGGACTCGATCTCTGAGATATAAGGTTGTGGATGAATGGAGGCCTTGGTTCACGGATGGTGTAGTTGCTGGGTTCTTGCAAGCATACGAACACCATCTTACCTTTCTCACCATCAAGGGAGCTGGACACACTGTCCCTGAATATAAGCCGCGGGAGGCACTGCATTTTTATAGCCGATGGTTGGAAGGAAAACGAATATAA 1515 0.4376 MFHISLLNVLSIWETTEHIFPLFKLSPLLDSLQINRNCEILCSALAVKNLGDTTYNNFLDHTYLSDHETTIREYLETTGSGIMEEELPESLKYVNVDGKNLFYYFVSSERNPWKDPVVLWLNGGPGCSSFDGFVYEHGPFNFEAAKKPGSLPTLHLNQYSWSKVSNVIYLDSPTGVGLSYSNNSTKYHTGDRQTASDTHVFLLKWFSQFPEFIDNPFYISGESYAGVFVPTLAHAIVKGIKHGAKSVINFKGYLIGNGATDKRFDGNALIPFVHGMGLISDDIYEDVKAACKGKYYDSKYAACTKNLDKVYKILEGLNVYYTIDSCYHDPPATAAAAAKGNGSLPLSFQQLGTTDKALPTDQVATSWLNNEEVRKAIHAEKISVAGPWELCTGRINYTFDVGSNMIPYHKKLTKELGYRALIFSGDHDMCVPFTGSEAWTRSLRYKVVDEWRPWFTDGVVAGFLQAYEHHLTFLTIKGAGHTVPEYKPREALHFYSRWLEGKRI. 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06447 504 FunFam Carboxypeptidase 356 504 - -
Seca7g06447 504 Pfam Serine carboxypeptidase 93 501 IPR001563 GO:0004185|GO:0006508
Seca7g06447 504 ProSitePatterns Serine carboxypeptidases, histidine active site. 471 488 IPR033124 GO:0004185
Seca7g06447 504 FunFam Carboxypeptidase 86 351 - -
Seca7g06447 504 SUPERFAMILY alpha/beta-Hydrolases 93 502 IPR029058 -
Seca7g06447 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 205 230 IPR001563 GO:0004185|GO:0006508
Seca7g06447 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 471 484 IPR001563 GO:0004185|GO:0006508
Seca7g06447 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 169 IPR001563 GO:0004185|GO:0006508
Seca7g06447 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 180 IPR001563 GO:0004185|GO:0006508
Seca7g06447 504 ProSitePatterns Serine carboxypeptidases, serine active site. 219 226 IPR018202 GO:0004185
Seca7g06447 504 Gene3D alpha/beta hydrolase 85 504 IPR029058 -
Seca7g06447 504 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 90 488 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06447 Seca-Chr7 165963981 165972709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06447 363 502 Calmodulin-binding Proteins AT2G22960 46.429 1.30e-37 134