Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06417 ATGGGTTCGGGAAACAGAACCTACTCTGTTAATCCCGCCGATTACAAGCTTCTAGAAGAAGTCGGTTACGGCGCCAGCGCCACCGTGTACCGCGCAATCTTCCTTCCTCACAACGAAGAGGTGGCGGTGAAGTGCCTCGATCTGGATCGCTGCAACGCCAATTTGGATGACATAAGGAAGGAAGCACAGCTTATGAGCTTGATCGACCACAAGAACCTCGTTAGGTCCTTCTGTTCCTTCGTTGTTCAACAAAAGCTTTGGGTTGTTATGCCTTTCATGGCGCAGGGTTCTTGCTTGCACCTCATGAAGGCTGCTTATCCTGATGGATTCGAAGAAGGCGCCATCGGATCCATCCTCAAGGAAACTCTCAAAGCGTTGGAGTATCTCCATCGACACGGTCACATTCATCGCGATGTTAAGGCTGGTAATATTTTGCTCGATTCCAACGGCGAAGTCAAACTCGCTGACTTCGGTGTTTCCGCTTCCATGTTTGATACCGGCGATCGTCAGCGTTCTAGAAACACTTTCGTCGGAACTCCTTGCTGGATGGCGCCTGAGGTACTGCAACCTGGAACTGGTTATAATTTCAAGGCTGATGTTTGGTCTTTTGGAATTACGGCACTGGAGTTGGCTCATGGTCATGCTCCTTTCTCCAAATACCCTCCTATGAAGGTTTTGCTAATGACCATACAGAATGCCCCTCCAGGACTTGATTATGATCGTGATAGAAAGTTCTCCAAGTCTTTTAAGGAAATGGTTGCTATGTGCCTGGTAAAAGATCAAACAAAGAGGCCAACTGTGGAGAAGTTACTGAAACACTCTTTCTTCAAACAAGCCAAGCCTCCAGAGCTTTCTGTAAAGAAATTATTTGCTGATTTACCACCTCTTTGGAATCGTGTGAAAACTCTCCAGATTAAAGATGCAGCTCAACTAGCACTAAAGAAAATGCCTTCTGCAGAACAAGAAGCAATATCTCAGAGTGAATATCAGCGAGGAGTCAGTGCGTGGAACTTTGATATTGATGACTTGAAAGCTCAAGCTTCATTGATGCAAGACGACGATGATATTGCAGAGATGAGGGAAGAAGATGAAAACAAATTCTTCAGCTCTTACAAGGATACAACAGATTCCCAATTTAGTGTGGGCAAAAAGGATTCAGATAACTTACAACAAGATGAGTTCACATTACAAGATGGTGGTAATGACATACCTCAAAGTGAGAAGAGAAATGGATCAATTGCTGAAGCAACACCATCTACCTTAGAGAAGGATATGGGAACAAGCAAGGTTAAAAATCAATCATTGAAAATTGGTAAAACCCAAAGTGGGCCGCTGGTGCCGGGCACAGTGCTTGGTCATTCTTTTCAAGAAAGAGGGCGCACATTTGAAAGGTTTGAGAATGAAAATCAGTCATTAGGTGAGAAAAGTAATCGTGATATGCGACGAGCTCCAAGCTTTAGTGGTCCATTAATGCTTCCAAACCGAGCATCGGCAAATAGTTTATCAGCTCCAATAAAATCTTCTGGAGGATTCAGAGATTCCTCAGATGACAAGTCTAAGGCTAATCTAGTGCAAATTAAAGGACGGTTCTCAGTGACATCAGAAAATTTAGATCTGGTGAAGGATATCCCAGTAAGTTCAGTTTCACGCCGATCTTCACAGGTTTGTCGATGA 1674 0.4415 MGSGNRTYSVNPADYKLLEEVGYGASATVYRAIFLPHNEEVAVKCLDLDRCNANLDDIRKEAQLMSLIDHKNLVRSFCSFVVQQKLWVVMPFMAQGSCLHLMKAAYPDGFEEGAIGSILKETLKALEYLHRHGHIHRDVKAGNILLDSNGEVKLADFGVSASMFDTGDRQRSRNTFVGTPCWMAPEVLQPGTGYNFKADVWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDRKFSKSFKEMVAMCLVKDQTKRPTVEKLLKHSFFKQAKPPELSVKKLFADLPPLWNRVKTLQIKDAAQLALKKMPSAEQEAISQSEYQRGVSAWNFDIDDLKAQASLMQDDDDIAEMREEDENKFFSSYKDTTDSQFSVGKKDSDNLQQDEFTLQDGGNDIPQSEKRNGSIAEATPSTLEKDMGTSKVKNQSLKIGKTQSGPLVPGTVLGHSFQERGRTFERFENENQSLGEKSNRDMRRAPSFSGPLMLPNRASANSLSAPIKSSGGFRDSSDDKSKANLVQIKGRFSVTSENLDLVKDIPVSSVSRRSSQVCR. 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06417 557 Pfam Protein kinase domain 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g06417 557 SUPERFAMILY Protein kinase-like (PK-like) 14 330 IPR011009 -
Seca7g06417 557 MobiDBLite consensus disorder prediction 376 428 - -
Seca7g06417 557 FunFam Serine/threonine-protein kinase BLUS1 4 92 - -
Seca7g06417 557 SMART serkin_6 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g06417 557 MobiDBLite consensus disorder prediction 492 509 - -
Seca7g06417 557 FunFam serine/threonine-protein kinase BLUS1-like isoform X2 96 326 - -
Seca7g06417 557 CDD STKc_OSR1_SPAK 14 276 - -
Seca7g06417 557 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Seca7g06417 557 Gene3D Transferase(Phosphotransferase) domain 1 96 328 - -
Seca7g06417 557 ProSiteProfiles Protein kinase domain profile. 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g06417 557 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Seca7g06417 557 MobiDBLite consensus disorder prediction 465 519 - -
Seca7g06417 557 MobiDBLite consensus disorder prediction 392 428 - -
Seca7g06417 557 MobiDBLite consensus disorder prediction 465 481 - -
Seca7g06417 557 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 7 545 IPR047173 GO:0043539
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06417 Seca-Chr7 165546676 165554618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06417 8 555 MAP Kinase Kinase Kinase Kinase AT4G10730 68.592 0.0 767
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Seca7g06417 Pkinase 2.1e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06417 - - gmx:100811264 1000.35