Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06416 ATGCATATGACATGTCTGCGTCTAACCATTTTTGATAATTTCATGTGTCCATGTCTGAATCATGTTGTGTGTCCCTTTCAGATATCATTATCAATTTCCAGTTGCCAGACTCGAGACAATAAAAAGTCCTCCTCGCAGGCTCCCAAATCCAAGAAAAGAGTAGAACCAATTAAGATGGCCAATCTTTTAAGCCATAAGTGGTTCTTGGTGTCTCTTTTGATTACATTGCTCCAAATCCAAACCAAGGTGCTCTGCTACCAATACAAAGTTGGAGATCTAGATTCTTGGGGGATACCCACCTCATCAAATCCACAAGTCTATGCCAAATGGTCCAAATATCACAATCTCACGCTTGGAGACTCACTTTTGTTTCTATACCCACCAAGTCAAGATTCAGTGATTCAAGTAACAGAGGAATCCTACAAGAGCTGCAACCTTAAAAACCCCATATCGTATATGAACAATGGAAACTCTTTGTTTAACATTACATCACATGGGGACTTCTACTTCACCAGTGGAGAGCCTGGTCATTGCCAAAAGAAGCAGAAGCTTCATATATCTGTGGGTGGAGGAGGAGGAAAGGAAAATGTGAATGCAGCACCTGGTCCAAGTTCATTGTCTGCATATGCACCTTCTTATCCCACAGTATTTGGCAACATTCCAATTTCTCCTTCTTCTTCAGCCTCACCTAAGCTAACTTCAACTTTTCAAGTCCTCACCATTGGATCTGTGATATGTGCACTGTTCTATGCCTTAATGTAA 762 0.4108 MHMTCLRLTIFDNFMCPCLNHVVCPFQISLSISSCQTRDNKKSSSQAPKSKKRVEPIKMANLLSHKWFLVSLLITLLQIQTKVLCYQYKVGDLDSWGIPTSSNPQVYAKWSKYHNLTLGDSLLFLYPPSQDSVIQVTEESYKSCNLKNPISYMNNGNSLFNITSHGDFYFTSGEPGHCQKKQKLHISVGGGGGKENVNAAPGPSSLSAYAPSYPTVFGNIPISPSSSASPKLTSTFQVLTIGSVICALFYALM. 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06416 253 PANTHER BLUE COPPER PROTEIN 84 212 IPR039391 GO:0009055
Seca7g06416 253 ProSiteProfiles Phytocyanin domain profile. 86 190 IPR003245 GO:0009055
Seca7g06416 253 SUPERFAMILY Cupredoxins 85 188 IPR008972 -
Seca7g06416 253 CDD OsENODL1_like 86 188 IPR041846 -
Seca7g06416 253 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Seca7g06416 253 FunFam Early nodulin-like protein 1 85 192 - -
Seca7g06416 253 Pfam Plastocyanin-like domain 105 181 IPR003245 GO:0009055
Seca7g06416 253 Gene3D - 86 200 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06416 Seca-Chr7 165543905 165545417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06416 69 253 Phytocyanin Superfamily AT1G64640 52.973 2.45e-51 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06416 - - gmx:100527517 285.419