Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06395 ATGGATATTGCTTCTCTTGAGAAGTTCCTTCATGAGAGGTTCAAAGTTCCTTCAGAAGTTCCTTCAAAAAGAGTAGATCTTGTACCCTGTTACTCCAACTCATTGGGATTAGGGCTTTCTACACACATTCTTAAGTATCTGAAATACTTAACCAAGAAGTACCTGAAAAAGCACAATGTGAGGGATTGGCTTCGGGTGATTGCCTCCAACAAGGACCAGAATGTCTATGAGTTGAGATACTTCAACATTGCTGAGAATGAGGTGAAGAGGAAGACTAAAGATCTAATTTTCTGTCTTGAGGCATTCTCCATTAGGTGTAATTGTTGTGGAGTCTCTTTAATATTTGTTGTTTAG 354 0.387 MDIASLEKFLHERFKVPSEVPSKRVDLVPCYSNSLGLGLSTHILKYLKYLTKKYLKKHNVRDWLRVIASNKDQNVYELRYFNIAENEVKRKTKDLIFCLEAFSIRCNCCGVSLIFVV. 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06395 117 Pfam Ribosomal L22e protein family 1 87 IPR002671 GO:0003735|GO:0005840|GO:0006412
Seca7g06395 117 Gene3D - 1 93 IPR038526 -
Seca7g06395 117 PANTHER 60S RIBOSOMAL PROTEIN L22 1 89 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06395 Seca-Chr7 165285893 165286712 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06395 1 87 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 44.660 8.04e-20 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06395 K02891 - mnt:21385989 98.5969