Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06385 ATGGAGATCATAGAAGCAAGCAAAGCAGCAGGGTTGAGCCCTCTGAGTGAGAGCATTTGGAGGGAAAAAACAAACACAGAGTTAATTGGAGATGTCTCAGCAAGGCTGACATGGAAGGATCTAACTGTGATGGTAACTCTGAGCAATGGAGAGAGCCAGAACGTTTTGGAGGGTCTAACTGGGTATGCTGAACCTGGAACCTTCACGGCTCTAATGGGTCCCTCTGGTTCAGGAAAATCTACCCTGCTCGATGCTCTGTCTAGTCGTCTAGCAGCAAATGCCTTCCTCTCAGGCACCATCCTCCTCAATGGTCGCAAAGCCAAGCTTTCCTTTGGCACAGCAGCTTATGTGACCCAAGATGACAACTTGATTGGTACACTAACGGTACGAGAAACAATTTGTTATTCAGCTCATTTGCGGCTGCCTGATAAAATGGCATGGTCAGATAAACGAGCTCTGGTTGAGAGTACCATTGTAGCGATGGGTCTTCAGGACTGTGCTGATACAGCGATTGGAAACTGGCATTTGCGTGGTATAAGTGGAGGAGAGAAGAGAAGGGTTAGCATTGCCTTGGAGATCTTGACAAGGCCTAGATTACTTTTCCTTGATGAGCCAACTAGTGGACTTGACAGTGCTTCGGCTTTCTTTGTGACTCAGACATTAAGAGCCCTGGCAAGGGATGGGCGAACTGTGATAGCTTCTATTCATCAGCCTAACAGTGAAGTGTTCGAACTATTTGACCAATTGTATTTGCTTTCTGGGGGCAAAACTGTTTATTTTGGCAAGGCTTCCGAAGCATATGAGGCAATAATTAAACTCATTATCCATCCACTTCTTCCTTTTTCTCTTATTTCCTTAAAATTTTCTGTTATTGTAAAGAAATTAAATGGAGTATTTTTTATAATTACAAGTGTACTATGTCTGCAGTTCTTTGCACAAGCTGGATTTCCATGCCCTGCTTTGAGAAACCCATCAGATCATTTTCTTAGTTTTTCTCAGTCTGAGGGAAGTGATGATCCCCTGGACAAGATCACTACTGCTGAAGCTATCAAAACTCTTACAGGCTACTACCGAACTTCTCAGTATTCTTATGCTGCAATGCGGAAAGTGGATGAGATATCCAAAGTTAAGGGAACAGTGCTTGATGCAGGAGGAAGTCAGGCTAGTTTTTTAATGCAATCTTACACCTTAACCAAGCGCTCATTCACCAACATGTCAAGGGATTTTGGGTACTATTGGCTTAGGCTTGTAATCTATATTGTAGTCACAATCTGCATTGGAACCATTTATTTGAACGTGGGGACGGGCTACAACTCAATTCTGGCAAGGGGTTCATGTGCATCTTTTGTCTTTGGTTTTGTCACCTTCATGTCAATTGGTGGGTTCCCTTCATTTGTTGAAGACATGAAGGTTTTCCAAAGAGAGAGGCTTAATGGCCACTATGGTGTCACGGCATTTGTTATCAGCAACACATTATCTGCAACTCCCTTCCTAATATTGATCACCTTTCTCTCAGGAACTATTTGTTACTTCATGGTTGGCCTACATCCTGGCTTTAGGCACTATCTGTTCTTTGTCTTGTGCCTATATGCCAGTGTTACAGTGGTTGAAAGCTTAATGATGGCCATTGCCAGCATTGTCCCCAACTTTCTCATGGGTATAATAATAGGAGCAGGGATTCAAGGCATATTCATGTTGGTCTCTGGCTACTTTAGGCTCCCACATGATATCCCAAAGCCAGTGTGGCGCTACCCAATGTCATATATCAGTTTCCACTTTTGGGCATTACAGGGACAATACCAGAATGATTTGCGGGGCTTGCTATTCGACAACCAGACACCAGATCTTCCCAAGATACCTGGTGAATACATCCTGGAGAATATCTTCCAGATTGATGTGAAGAGATCCAAGTGGATAGATTTAAGTGTGATCTTAAGCATGATTGTCATCTACCGCATTATCTTCTTGATGGTGATTAAGATCAATGAGGATGTTACACCATGGGTTAGAGGCTACATAGCTAGGAGAAGAATGCAGCTGAAGAATGGAACCCAGAATACAACTATTGCTCCTGATGTTCTCACTCAATCCCCATCCCTCAGAACCTATATCTCGATTTAA 2121 0.4319 MEIIEASKAAGLSPLSESIWREKTNTELIGDVSARLTWKDLTVMVTLSNGESQNVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSSRLAANAFLSGTILLNGRKAKLSFGTAAYVTQDDNLIGTLTVRETICYSAHLRLPDKMAWSDKRALVESTIVAMGLQDCADTAIGNWHLRGISGGEKRRVSIALEILTRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPNSEVFELFDQLYLLSGGKTVYFGKASEAYEAIIKLIIHPLLPFSLISLKFSVIVKKLNGVFFIITSVLCLQFFAQAGFPCPALRNPSDHFLSFSQSEGSDDPLDKITTAEAIKTLTGYYRTSQYSYAAMRKVDEISKVKGTVLDAGGSQASFLMQSYTLTKRSFTNMSRDFGYYWLRLVIYIVVTICIGTIYLNVGTGYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVTAFVISNTLSATPFLILITFLSGTICYFMVGLHPGFRHYLFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGYFRLPHDIPKPVWRYPMSYISFHFWALQGQYQNDLRGLLFDNQTPDLPKIPGEYILENIFQIDVKRSKWIDLSVILSMIVIYRIIFLMVIKINEDVTPWVRGYIARRRMQLKNGTQNTTIAPDVLTQSPSLRTYISI. 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06385 706 SMART AAA_5 65 236 IPR003593 GO:0016887
Seca7g06385 706 Pfam ABC transporter 58 207 IPR003439 GO:0005524
Seca7g06385 706 CDD ABCG_EPDR 33 261 - -
Seca7g06385 706 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 36 279 IPR003439 GO:0005524
Seca7g06385 706 Gene3D - 30 273 IPR027417 -
Seca7g06385 706 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 24 681 - -
Seca7g06385 706 ProSitePatterns ABC transporters family signature. 179 193 IPR017871 GO:0005524|GO:0016887
Seca7g06385 706 FunFam ABC transporter G family member 11 30 272 - -
Seca7g06385 706 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 268 IPR027417 -
Seca7g06385 706 Pfam ABC-2 type transporter 393 599 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06385 Seca-Chr7 165172445 165177806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06385 54 247 Calmodulin-binding Proteins AT2G36910 31.220 5.15e-10 61.2