Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06360 ATGATCATTCCGGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTTCAAGAGGGAGTATGCTACGCAAAGAAGGATTACAATTTAGCAAAGCACCCAGATATCGATGTGCCAAATCTGCAGGTGATTAAGCTGATGCAGAGCTTCAAGTCTAGGGAGTACGTTAGAGAGACCTTTGCTTGGATGAACTACTACTGGTTCCTCACAAACGAAGGCATTGAGTTCCTCAGAGGATACCTTAATCTTCCTTCTGAAATTGTTCCTGCTACTTTGAAGAAACAAGCCAAGCCCCCTGGTAGATCATTCGGTGGTCCACCCGGTGATCGCCCTAGGGGTCCACCACGCTTTGAAGGAGAACGTAGATTTGGTGACCGTGATGGGTACCGTGGAGGTCCCCGAGGACCGGGTGGTGACTTTGGAGGAGACAAAGGAGGAGCTCCTGCTGACTACAGACCCTCCTTTGGGGGTCCTGGCGGAAGGCCTGGCTTTGGTCGTGGATCTGGTGGTTTTGGGGCTCCAACCAGCTCAAATCTTCCCTAA 540 0.5037 MIIPEKNRKEICKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSREYVRETFAWMNYYWFLTNEGIEFLRGYLNLPSEIVPATLKKQAKPPGRSFGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGPGGRPGFGRGSGGFGAPTSSNLP. 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06360 179 MobiDBLite consensus disorder prediction 91 179 - -
Seca7g06360 179 MobiDBLite consensus disorder prediction 112 128 - -
Seca7g06360 179 PANTHER 40S RIBOSOMAL PROTEIN S10 1 173 IPR037447 -
Seca7g06360 179 Pfam Plectin/S10 domain 3 94 IPR005326 -
Seca7g06360 179 Gene3D - 1 103 IPR036388 -
Seca7g06360 179 FunFam 40S ribosomal protein S10 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06360 Seca-Chr7 164893879 164895966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06360 1 179 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 75.556 2.23e-75 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06360 K02947 K09422 gmx:100500445 229.95