Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca7g06345 | ATGGCTTCAATTGCGAATGGCCAAGAAGCAATTGAACTCTTTCAGGGCCAAGCTTTGTTGTACATGAACATGTTTGGCTTCCTAAAATCCATGTGTCTTAAATGGGCTGTCCAACAAGGCATTGCAGACATAATACACAACCATGCCAAACCCATTACTCTTCCTGAATTGGTGTCAACTCTTCAAGTTCCACCATCCAGGGCTAGTTTTGTGCAGCGACTCATGCGCTTTCTAGCACACAATGGAATCTTTGCAATAATCCATGAGAGCAAAGAGGGTCATGAAGCATATGCTCTGACTCCAGCATCAAAGCTTCTTTCAAAGGCATGTAGTGACCATTGTTTGTCTCCAATTGTTAAGATGTCTACTGATCCAGTTCTCATGAATAAGTTCCACCAATTGGGGGACTGGATTTGTGGAGAAATCCCCACTTTATATGAGGCAGCCTTAGGAAAACCCGTGTGGGAATTTCTTGAGGAAACTCCTGCTTATATGAGTCTCTTCAATGAGGCAATGGCAGGGGATTCTCAAATGGTAGACTTGGCATTGAAAAATTGCAGTTCAGTCTTTGAGGGGCTAGATTCCATTGTGGATGTTGGTGGTGGAACTGGAACCACAGCTAAAATTATCTCTGAGGCATTCCCTAAGTTAAATTGTGTTGTGTTTGACCTTCCACAGGTTGTGGCTAATTTGTCAGGTAACAACAATTTGAGTTATGTTGGTGGGGACATGTTCCAATCTATCCCTCAAGCCGATGCAATTCTAGTAAAGTGGATTCTACATGATTGGACGGATGAAATTTGCATAAAGATTCTGAAAAACTGTAAAGATTCTGTTTCAAGAAATGACAAAAGAGGAAAAGTGATTATCATGGATATAATAATAAATGAAAAGGAAGATGACCAAGATATGACTCAAACAAAACTTTGTATGGATATAATCATGATGGGTATTAATGGAAAAGAGAGAACTGAAAAAGAATGGAAGCAACTCTTCATTGAGGCAGGGTTCAAACACTATAAAATATTTCCCTTATTTGGCCTTGCGAATAGCCAAGAAGCAATTGAACTCTTCCAAGGCCAAACTTTGCTGTACATGAACATGGCTGGCTTCCTAAAATCCATGTGTCTTAAATGGGCTGTCCAACAAGGCATTGCAGACATAATACACAACCATGCCAAACCCATCACTCTTCCTGATTTGGTGTCAACTCTTCAAGTTCCACCATCAAGGGCTAGTATTGTGCAAAGATTCATGCGCTTTCTAGCACACAATGGAATCTTTGCAATAATCCATGAGAGCAAAGAAGGTCATGAAGCATATGCTCTGACCCCAGCATCAAAGCTTCTAATTTCTAAGGCATGTAGTGGCCCTTGTTTATCTCCAATGGTTAAGATGGCTTGTGATCCAGTTCTGATGAATGCATACCACCACTTGGGGGACTGGATTTGTGGGGAAATCCCCACTTTATATGAGGCAGCCTTAGGAAAACCTTTTTGGGAATTTCTTGGGGAAAATCCTGCTTATATGAGTCTCTTCAATGAGGCAATGGCAGCGGATTCTCAAATGGTAGACTTGGCATTGAAAAATTGTAGTTCAGTCTTTGAGGGGCTTGATTCCATTGTGGATGTTGGTGGTGGAATTGGAACCACAGCTAAAATTATATGTGAGGCATTTCCTAAGTTGAAATGTGTTGTGTTTGACCTTCCTCAGGTTGTGGCTAACTTGTCAGGTAGCAATAATTTGAGTTATGTTGGTGGGGACATGTTCAAATTTATCCCTCAAGCTGATGCAATTCTACTAAAGTGGATTCTACATGATTATACGGATGAAATTTGCCTAAAGATTCTGAAAAGCTGTAAAGATTCTCTTTCAAGGAATGACAAAAGAGGGAAAGTGATTATCATGGATATAGTTATAAATGAAAAGGAAGACGATCAAGATATGACTCAAACAAAGCTTTCTATGGATATAATCATGATGAATGTTAATGGAAAAGAGAGAACTGAAAAAGAATGGAAGCAACTCTTCATTGAGGCAGGGTTCAAACAATATAAAATATTTCCCTTCTTTGGCTTTAAATCTCTTATTGAACTCTATCCTTAG | 2106 | 0.397 | MASIANGQEAIELFQGQALLYMNMFGFLKSMCLKWAVQQGIADIIHNHAKPITLPELVSTLQVPPSRASFVQRLMRFLAHNGIFAIIHESKEGHEAYALTPASKLLSKACSDHCLSPIVKMSTDPVLMNKFHQLGDWICGEIPTLYEAALGKPVWEFLEETPAYMSLFNEAMAGDSQMVDLALKNCSSVFEGLDSIVDVGGGTGTTAKIISEAFPKLNCVVFDLPQVVANLSGNNNLSYVGGDMFQSIPQADAILVKWILHDWTDEICIKILKNCKDSVSRNDKRGKVIIMDIIINEKEDDQDMTQTKLCMDIIMMGINGKERTEKEWKQLFIEAGFKHYKIFPLFGLANSQEAIELFQGQTLLYMNMAGFLKSMCLKWAVQQGIADIIHNHAKPITLPDLVSTLQVPPSRASIVQRFMRFLAHNGIFAIIHESKEGHEAYALTPASKLLISKACSGPCLSPMVKMACDPVLMNAYHHLGDWICGEIPTLYEAALGKPFWEFLGENPAYMSLFNEAMAADSQMVDLALKNCSSVFEGLDSIVDVGGGIGTTAKIICEAFPKLKCVVFDLPQVVANLSGSNNLSYVGGDMFKFIPQADAILLKWILHDYTDEICLKILKSCKDSLSRNDKRGKVIIMDIVINEKEDDQDMTQTKLSMDIIMMNVNGKERTEKEWKQLFIEAGFKQYKIFPFFGFKSLIELYP. | 702 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca7g06345 | 701 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 365 | 701 | IPR016461 | GO:0008168 | |
| Seca7g06345 | 701 | SUPERFAMILY | "Winged helix" DNA-binding domain | 356 | 452 | IPR036390 | - | |
| Seca7g06345 | 701 | Pfam | O-methyltransferase domain | 476 | 683 | IPR001077 | GO:0008171 | |
| Seca7g06345 | 701 | Pfam | O-methyltransferase domain | 131 | 338 | IPR001077 | GO:0008171 | |
| Seca7g06345 | 701 | Pfam | Dimerisation domain | 31 | 79 | IPR012967 | GO:0046983 | |
| Seca7g06345 | 701 | Pfam | Dimerisation domain | 375 | 423 | IPR012967 | GO:0046983 | |
| Seca7g06345 | 701 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 112 | 347 | IPR029063 | - | |
| Seca7g06345 | 701 | Gene3D | - | 1 | 106 | IPR036388 | - | |
| Seca7g06345 | 701 | PANTHER | O-METHYLTRANSFERASE | 15 | 341 | IPR016461 | GO:0008168 | |
| Seca7g06345 | 701 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 21 | 359 | IPR016461 | GO:0008168 | |
| Seca7g06345 | 701 | FunFam | Coniferyl alcohol 9-O-methyltransferase | 348 | 450 | - | - | |
| Seca7g06345 | 701 | Gene3D | - | 353 | 450 | IPR036388 | - | |
| Seca7g06345 | 701 | Gene3D | Vaccinia Virus protein VP39 | 110 | 352 | IPR029063 | - | |
| Seca7g06345 | 701 | Gene3D | Vaccinia Virus protein VP39 | 456 | 701 | IPR029063 | - | |
| Seca7g06345 | 701 | FunFam | O-methyltransferase ZRP4 | 109 | 359 | - | - | |
| Seca7g06345 | 701 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 457 | 699 | IPR029063 | - | |
| Seca7g06345 | 701 | FunFam | O-methyltransferase ZRP4 | 455 | 701 | - | - | |
| Seca7g06345 | 701 | FunFam | Coniferyl alcohol 9-O-methyltransferase | 3 | 106 | - | - | |
| Seca7g06345 | 701 | SUPERFAMILY | "Winged helix" DNA-binding domain | 12 | 108 | IPR036390 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Seca7g06345 | Seca-Chr7 | 164758611 | 164764487 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Seca7g06345 | 375 | 699 | Monolignol Biosynthesis Gene Families | AT5G54160 | 35.736 | 1.00e-53 | 187 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca7g06345 | K22588 | - | gmx:100818947 | 511.146 |