Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06340 ATGAGGAAACAATATAGAAAGATGACTCATGTGCTTCACCCTCATAATAACAACTCCGTTGGTGCAGATGGGGCCTTTAAACTGATTTCAGATGCATGGAGTTTACTATCAGATGAGGCTAAAAGAGTAGCATATGATGAGAAGATAAATGCAAAATCAGCTCAAACAGGGGCTGATGGAAGTTACAGTTTTACTAAGACTACTGCTTCAAATGCAAGGACTCAGGGGAAAACTGCTGATGGCATGAAAGTTGTGAAGGACGAAGAAATGGTTATGGTTAACAATGAGGATACTATAATTAAAGAAACAACAGATGATAACATGAAAGAAGCTGATGGTGAGGAAATGAACAAAGATATGGGAGCATCTGGCGAAGAGAAGAAGGAAATTGAAACTATGGAAGAGGGGAAAAAATGGTAG 420 0.3881 MRKQYRKMTHVLHPHNNNSVGADGAFKLISDAWSLLSDEAKRVAYDEKINAKSAQTGADGSYSFTKTTASNARTQGKTADGMKVVKDEEMVMVNNEDTIIKETTDDNMKEADGEEMNKDMGASGEEKKEIETMEEGKKW. 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06340 139 ProSitePatterns Nt-dnaJ domain signature. 26 45 IPR018253 -
Seca7g06340 139 MobiDBLite consensus disorder prediction 94 139 - -
Seca7g06340 139 Pfam DnaJ domain 2 46 IPR001623 -
Seca7g06340 139 SUPERFAMILY Chaperone J-domain 1 64 IPR036869 -
Seca7g06340 139 ProSiteProfiles dnaJ domain profile. 1 49 IPR001623 -
Seca7g06340 139 Gene3D DnaJ domain 1 135 IPR036869 -
Seca7g06340 139 CDD DnaJ 2 38 IPR001623 -
Seca7g06340 139 PANTHER BNAC03G44070D PROTEIN 2 66 - -
Seca7g06340 139 PRINTS DnaJ domain signature 21 41 IPR001623 -
Seca7g06340 139 PRINTS DnaJ domain signature 5 20 IPR001623 -
Seca7g06340 139 PRINTS DnaJ domain signature 41 60 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06340 Seca-Chr7 164736741 164737398 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06340 1 50 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 40.000 1.29e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06340 - - ahf:112751648 103.219