Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06331 ATGCTTGGTGCTGCTGGGTTCATCATTCCTGAGGCCTTAAATAAATTTGGAGCTAACTGTGGTCCTGAGGCTGTTTGGTTCAAGACTGGAGCTTTGCTTCTTGATGGTGGTACGTTGAACTACTTTGGGAAACCTATCCCCATCAATCTTATCATTGCTGTCGTTGCTGAGATAGTTCTTCTGGGTGGAGCAGAGTACTACAGAATTATTAATGGCCTGGATTTTGAAGACAAGCTTCATCCAGGTGGTCCATTTGACCCTTTGGGGCTAGCAAATGATCCAGACCAAGCTGCACTGTTAAAGGTGAAGGAAATTAAGAATGGTAGACTTGCTATGTTTGCCATGCTTGGTTTCTACTTCCAAGCTTATGTAACTGGAGAAGGTCCTGTTGAGAACTTCACAAAACATCTCAGTGACCCTTTTGGTAACAACTTGCTCACTGTCATTGCTGGCTCTGCTGAGAGGGCTCCAACTCTGTGA 480 0.4479 MLGAAGFIIPEALNKFGANCGPEAVWFKTGALLLDGGTLNYFGKPIPINLIIAVVAEIVLLGGAEYYRIINGLDFEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENFTKHLSDPFGNNLLTVIAGSAERAPTL. 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06331 159 SUPERFAMILY Chlorophyll a-b binding protein 1 150 - -
Seca7g06331 159 Gene3D Chlorophyll a/b binding protein domain 1 159 - -
Seca7g06331 159 FunFam Chlorophyll a-b binding protein, chloroplastic 1 159 - -
Seca7g06331 159 Pfam Chlorophyll A-B binding protein 1 122 IPR022796 -
Seca7g06331 159 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 148 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06331 Seca-Chr7 164677086 164678917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06331 1 159 Chloroplast and Mitochondria Gene Families AT4G10340 90.566 4.95e-94 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06331 K08916 - gmx:100806585 313.923