Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06330 ATGGGTTTTTCAGTGCTACTACTTCTCTTCTCTCTTCTGTTTTTCCTCTTAAACCCAACATGGGTCTGCGGGAATGCAGAGCTAAGAGCACTGATGGACTTGAAAGCCAGTTTGGACCCAGAGAGCCATTACCTACCCTCCTGGACTATCAATGGTAACCCATGTGATGGATCTTTTGAAGGAGTAGCATGCAATGAGAAGGGCCAAGTGGCTAACATTTCTTTGCAGGGAAAGGGCCTCTCAGGGAAGCTTTCACCAGCCATTGCTGGGCTCAAGCACTTGACAGGACTCTACTTGCATTATAACTCTTTGTATGGAGAGATACCAACAGAAATTGCAAACTTGACTGAGCTTAGTGATTTGTATTTGAATGTGAATCATCTTTCTGGGGAAATCCCTTCTGAGATCAGCAGCATGGAGAACTTGCAAGTTTTGCAGCTTTGTTATAATCAGTTGACAGGAAGCATGCCTACCCAGCTTGGTTCTTTGAAAAAGCTAACTGTTGTTGCTCTGCAGTCAAACCAGTTATCTGGTGCTATCCCTGCTAATCTAGGTGATTTGGGTATGCTGGTGAGACTAGATTTAGGCTCTAACAATCTCTTTGGTTCCATTCCCACTAGCCTAGCTGATGCTCCTTCACTGAAAGTTCTGGATGTTCACAACAATACACTTTCTGGGAATGTACCTCTTGCTCTTAAGAGACTAGATGATGGGTTTTCTTATGAAGACAATTTGGGGTTATGTGGAGTTGGGTTTCCACCCTTGAAAACTTGCAATGATTCAGATCATGTCAATCCAAGCAGACCTGAACCTACAAGAGATATCCCAGAAACTGCAAATGTGAAGTTACCTTGCAATGGAACTCGGTGCCTTAATTCATCAAAATCCAATCCAGCCACATCAATTATTGTTGGCATATTTGTGGCTATAATTGCAATGTTAGCTATTGGTATTTTGACCTTCACACTATACCGTCGGCGAAAACAAAAGCTTGGAAATTCTTTTCATACATCTGATAGTCGTCCAAGTACTGATGAAGCCAAGGGCATATACAGGAAAAATGGATCTCCTTTGGTTAGCCTTGAGTACTCTACTGGATGGGACCCTTTAGCTGATAGCAGGAGTTTCAATGGGGATAGCCAAGATAGGTTCCAAAGTTTTAGGTTCAACTTGGAAGAAGTTGAATCAGCTACTCAATATTTCTCAGAGCTGAATTTGTTGGGCAAGAGTAACTTCAGTGCAACATATAAAGGAGTTCTAAGAGATGGATCTGTTGTTGCTGTGAAGAGCATTAGTAAAACAAGTTGCAAGTCTGATGAAGCTGAGTTTTTGAAGGGACTGAATATGTTGACTTCACTGAGGAATGATAATTTAGTAAGGTTGAGAGGATTTTGTTGCTCAAGGGGAAGAGGTGAATGCTTTCTGATTTATGATTTTGTTCCTAATGGAAATCTGTCATGCTTCCTTGATGTGAAGGAAGGTGATGGAGAAGTCCTTGAATGGTCAACTAGAGTTTCTATTGTGAAAGGGATTGCTAAAGGTATGGCATATTTACATGCATACAAAGCAAACAAACCAGTTCTTGTTCACCAAAACATTTCAGCTGACAAAGTTCTCATTGATCGGCGCTACAATCCATTGCTAGCAGATTCTGGCTTGTACAAGCTTCTCACCAATGATATCGTGTTCTCTGCACTTAAGGCTAGTGCAGCAAAGGGTTACTTGGCTCCTGAATACACCACTACTGGTCGGTTTACAGAGACAAGTGATGTTTATGCTTTTGGGGTGCTGCTTTTCCAGATCCTTTCAGGGAAACAGAAGATAATTAGCTCAATAAGGCTTTCTGCAGAATCATTCAGATTCAAAGAATTTATTGACCCAAATCTCTATGGCAGGTTCTTTGAATATGAAGCAGCTAAACTGACAAAAATAGCCTTGCTTTGCACCCATGAATCTCCTTTTGAGAGGCCATCCATGGAAGTAATTGTTCAAGAACTGGGAAATTGTAGTAGCTGTCTCTGA 2022 0.4144 MGFSVLLLLFSLLFFLLNPTWVCGNAELRALMDLKASLDPESHYLPSWTINGNPCDGSFEGVACNEKGQVANISLQGKGLSGKLSPAIAGLKHLTGLYLHYNSLYGEIPTEIANLTELSDLYLNVNHLSGEIPSEISSMENLQVLQLCYNQLTGSMPTQLGSLKKLTVVALQSNQLSGAIPANLGDLGMLVRLDLGSNNLFGSIPTSLADAPSLKVLDVHNNTLSGNVPLALKRLDDGFSYEDNLGLCGVGFPPLKTCNDSDHVNPSRPEPTRDIPETANVKLPCNGTRCLNSSKSNPATSIIVGIFVAIIAMLAIGILTFTLYRRRKQKLGNSFHTSDSRPSTDEAKGIYRKNGSPLVSLEYSTGWDPLADSRSFNGDSQDRFQSFRFNLEEVESATQYFSELNLLGKSNFSATYKGVLRDGSVVAVKSISKTSCKSDEAEFLKGLNMLTSLRNDNLVRLRGFCCSRGRGECFLIYDFVPNGNLSCFLDVKEGDGEVLEWSTRVSIVKGIAKGMAYLHAYKANKPVLVHQNISADKVLIDRRYNPLLADSGLYKLLTNDIVFSALKASAAKGYLAPEYTTTGRFTETSDVYAFGVLLFQILSGKQKIISSIRLSAESFRFKEFIDPNLYGRFFEYEAAKLTKIALLCTHESPFERPSMEVIVQELGNCSSCL. 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06330 673 Gene3D Phosphorylase Kinase; domain 1 371 479 - -
Seca7g06330 673 Gene3D Ribonuclease Inhibitor 26 139 IPR032675 -
Seca7g06330 673 SUPERFAMILY L domain-like 23 233 - -
Seca7g06330 673 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Seca7g06330 673 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 156 667 IPR046959 -
Seca7g06330 673 Pfam Protein tyrosine and serine/threonine kinase 405 666 IPR001245 GO:0004672|GO:0006468
Seca7g06330 673 CDD STKc_IRAK 407 666 - -
Seca7g06330 673 Gene3D Ribonuclease Inhibitor 141 259 IPR032675 -
Seca7g06330 673 FunFam Protein NSP-INTERACTING KINASE 2 24 173 - -
Seca7g06330 673 SUPERFAMILY Protein kinase-like (PK-like) 379 666 IPR011009 -
Seca7g06330 673 ProSiteProfiles Protein kinase domain profile. 401 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g06330 673 Gene3D Transferase(Phosphotransferase) domain 1 480 672 - -
Seca7g06330 673 FunFam Protein NSP-INTERACTING KINASE 2 372 479 - -
Seca7g06330 673 CDD TM_EGFR-like 296 330 - -
Seca7g06330 673 FunFam Protein NSP-INTERACTING KINASE 2 480 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06330 Seca-Chr7 164665035 164668105 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06330 4 514 Miscellaneous Gene Families AT4G22730 55.955 0.0 569
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Seca7g06330 PK_Tyr_Ser-Thr 1.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06330 - - gmx:100775422 1162.52