Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06326 ATGTCATTTCATTCAGCGGAAGCCATTAAATCATTCTATCGCCAATATGCTACTAGAAAAGGATTCAGGATCATGACAAGAAACTCAAGAAAAGGGGCTGATGGCAAACTAAAATACTTCATCTTGGCATGTTCAAGAGAGGGGAATTATGTTTCGATGATACCCAACGACTTTAAGACATATCCCACAATAAAGAATAAATGTCCAGCGAGGATCACAGTGGCATTGAAAGATGGACTTTGGTACATTATGACAGTTCATACTGACCATTGTCATGACTTTAACCCTGTTAAGTCTATGTTGTTTAGCGGGAACAAAACCATGAGCATGCACGTGAAGAGAGCTATTCAGATAAATGATGAAGAAGGCATGAGGTTGAACAAGAGCTACCGTCCTCTTCTTTATGATGTGGAAGGATATGAAAATTTGTCATTTGTTGAACAAGACGTCGGAAATGTTGTGGGGAGGGAAAGACGCACACTCGGGAAGGAAGGTGATGGTAAGGCACTATTAGCATATTTTGCACAAATGCAGCAACACAATAGAAACTTCTTTTATGAAGTTGATTTGGATGATGACTTCCATGTGAACAATTATGAAATGCCATTTGCACTATTTGTTGGGGTCAATCATCATGGGCAACCGATTTTGCTAGGGTGTGGCTTGCTATCTGCTGAAGACACTGAGTCATTTGCATGGCTGTTTCAATCATGGCTTCGATGTATGTCAGGAAAGGCCCCGGAAGGTATTATCACTGACCAATGCAAGGCAATGCAAAATGCTATCGAGTTAGTGTTTCCTAATGCTCGGCACAGGTGGTGCCTATGGCATATAATGAAGAAAATGCCTAAGAAGTTGATAGGTCTTCCTGAGTATAAGAATATATTGAATGCAATGAACATTGCAGTTTATGATTCATTGACCGTGGATGAATTTGAAAGTATGTGGAGTAGTTTCATTGAAAAATTTGGTCTAGGAGACAACGAATGGTTAAATGGACTATACAAAGAACAATCAAAATGGGTGCCATGTTTTATAAAGCAAGATTTTTGGGCTGGAATGTCAACCACACAGAGAAGTGAAAGTATTCGTGCCTTTTTTGATGGATATATAAATGCAACAACAACACTCCAACAGTTTCTAAGGCAATGTGACAATGCCCTCCAAGACAAGGCGGAAAAGGAATATGAGGCTGATGTTCGATCATTAAACTCCACAATTCCTTGTGGGTCAAACTCCATGATTGAGAGGCAATTCCAAGCTGAATACACTCACGCGAAATTTAATGAGGCTCAAGCTGAGTTTAGAGGGAAAATGAATTGTTGTCTTAGTTGCAGGGGTATGGATGGTTCTAAATGTACATATGATGTGATGGAGGAGATGCTAGTTTCTGGGTGTCCAAAGGAAGCAAATTTCCATGTGGTATTCAATCGTGATAATCACGATGTTAAGTGCAGCTGTTTACTGTTTGAGTTTAAAGGCATAATGTGTAGACATTCACTTCTTGTCCTAGCTAAAGAAAGGGTGAAAGAAGTGCCATCTAAGTTTGTTTTGACCAGATGGAGCAAAAATGTACGTAGGAAACATGCGTACATCAAGACCAGTTACGATGTCAAGCAGATGCAGCCACAGATGCACAGATTTGATGATTTATGCAATGAGTTCTATAAAATTGCAGAGATTGCAGCTGAATCACCAGATGCCACTGATTGGCTATGCCAATCAGTGCGTGCAATTAAGGACAAGCTGCACACAGTTGCTGCACTTCCGCACAGTCGTGGTGATGACCGGGTTGAAGGTGAAGTGAAAGGGTCAGAAAAATGTGTACCTGACAATAATAGTAAAGGATAG 1851 0.4036 MSFHSAEAIKSFYRQYATRKGFRIMTRNSRKGADGKLKYFILACSREGNYVSMIPNDFKTYPTIKNKCPARITVALKDGLWYIMTVHTDHCHDFNPVKSMLFSGNKTMSMHVKRAIQINDEEGMRLNKSYRPLLYDVEGYENLSFVEQDVGNVVGRERRTLGKEGDGKALLAYFAQMQQHNRNFFYEVDLDDDFHVNNYEMPFALFVGVNHHGQPILLGCGLLSAEDTESFAWLFQSWLRCMSGKAPEGIITDQCKAMQNAIELVFPNARHRWCLWHIMKKMPKKLIGLPEYKNILNAMNIAVYDSLTVDEFESMWSSFIEKFGLGDNEWLNGLYKEQSKWVPCFIKQDFWAGMSTTQRSESIRAFFDGYINATTTLQQFLRQCDNALQDKAEKEYEADVRSLNSTIPCGSNSMIERQFQAEYTHAKFNEAQAEFRGKMNCCLSCRGMDGSKCTYDVMEEMLVSGCPKEANFHVVFNRDNHDVKCSCLLFEFKGIMCRHSLLVLAKERVKEVPSKFVLTRWSKNVRRKHAYIKTSYDVKQMQPQMHRFDDLCNEFYKIAEIAAESPDATDWLCQSVRAIKDKLHTVAALPHSRGDDRVEGEVKGSEKCVPDNNSKG. 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06326 616 Pfam MULE transposase domain 190 281 IPR018289 -
Seca7g06326 616 ProSiteProfiles Zinc finger SWIM-type profile. 472 508 IPR007527 GO:0008270
Seca7g06326 616 MobiDBLite consensus disorder prediction 594 610 - -
Seca7g06326 616 SMART 26again6 483 510 IPR006564 GO:0008270
Seca7g06326 616 Pfam FAR1 DNA-binding domain 11 95 IPR004330 -
Seca7g06326 616 Pfam SWIM zinc finger 484 504 IPR007527 GO:0008270
Seca7g06326 616 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 584 IPR031052 GO:0006355
Seca7g06326 616 MobiDBLite consensus disorder prediction 594 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06326 Seca-Chr7 164603108 164605045 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g06326 MULE 1.2e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06326 - - gmx:102667848 751.51