Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06274 ATGGATAGATGCTGGTTTAATAAGTACAAGTCAAAGGATAAAATGCAGTCTTCAAAACACAAGGAAACTACAGGCATTGCAAAAGAAGGGTCAAAACCCCCAACAAATGAAGAAGCACCTTCAAATGTGACCAAACAGAAAGTTGCTGCTGCAAAGCAGTACATAGAAAACCATTATAAGAAGCAGATGAAGGATCTGCAGGAGAGAAAGGAACGACGTGATATGCTAGAAAAAAAGTTGGCTGATGCTGAAGTCTCTGAGGAAGAGCAGAACAACTTGCTTAAGTATTTTGAGAAAAAGGAGAGGGAATACATGCGCCTTCAGAGGCATAAGATGGGAGCTGATGATTTTGAGCCCCTGACTATGATAGGGAAGGGTGCATTTGGAGAGGTCAGAATCTGCCGGGAGAAGGCAACTGGTCATGTATATGCTATGAAGAAGCTTAAGAAATCAGAGATGCTCCGCAGAGGCCAGGTTGAACATGTAAAAGCGGAGAGGAACCTACTTGCAGAAGTTGACAGCAATTGCATTGTGAAGCTTTATTATTCCTTTCAAGATGAAGAGTATTTATATCTAATAATGGAGTATCTACCTGGTGGTGATATGATGACATTGCTCATGCGGAAGGATATACTGACAGAAGATGAGGCCAGGTTCTATGTTGGGGAGACTGTCCTAGCCATAGAGTCAATTCATAAACACAACTATATTCACAGAGATATCAAGCCTGACAACTTGCTGCTAGATAGAAACGGTCACATGAAATTATCAGACTTTGGATTATGTAAACCACTAGACTGCAGTAATCTTCAGGAAAAGGACTTCTCTACTGGAAGCAACAGAAGTGGAGCCCTTCAGAGCAATGGACATCCTGTTCCTGTGGCTCCCAGAAGAACTCAGCAGGAGCAACTGCAGCATTGGCAGAAAAATAGGCGAATGCTTGCGTATTCTACAGTTGGGACACCTGACTATATTGCCCCTGAAGTTCTACTGAAGAAAGGATATGGCATGGAATGTGATTGGTGGTCTTTGGGAGCTATAATGTATGAAATGCTAGTGGGATATCCACCCTTTTATTCAGATGAACCAATGTTGACTTGTAGAAAGATAGTAAATTGGAGAACTCATTTGAAATTTCCAGAAGAAGCTAAACTATCTGCAGAGGCAAAGGATCTTATTAGTAGACTACTATGTAATGTAGAACAGAGGCTTGGAACCAAAGGGGCTGATGAAATAAAGGCTCACCCATGGTTCAAAGGTATTGAATGGGACAAATTGTACCAAATGAAAGCTGCTTTTATTCCGGAGGTCAATGATGAATTAGATACTCAAAATTTTGAGAAGTTTGAAGAGGTGGACAACCAAACTCAACCTTCCTCAAAATCAGGCCCATGGAGAAAGATGCTGTCATCTAAAGATGTTAACTTTGTTGGCTACACGTATAAGAACTTTGAAATCGTGAATGATGATCAGCTACCTGGAATTGCCGAATTGAAGAAGAAGAGCACAAAACCAAAACGACCATCTATTAAGACCCTATTTGATGATGAATCGGCTACTGCTAATCAACCTGTCCAAGGGAGCTTCTTAAAACTCTTACCAACTCAACCAGAAGTTCCTGAGAAGAGTGAATCGCAATGA 1641 0.4113 MDRCWFNKYKSKDKMQSSKHKETTGIAKEGSKPPTNEEAPSNVTKQKVAAAKQYIENHYKKQMKDLQERKERRDMLEKKLADAEVSEEEQNNLLKYFEKKEREYMRLQRHKMGADDFEPLTMIGKGAFGEVRICREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYYSFQDEEYLYLIMEYLPGGDMMTLLMRKDILTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSTGSNRSGALQSNGHPVPVAPRRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMLTCRKIVNWRTHLKFPEEAKLSAEAKDLISRLLCNVEQRLGTKGADEIKAHPWFKGIEWDKLYQMKAAFIPEVNDELDTQNFEKFEEVDNQTQPSSKSGPWRKMLSSKDVNFVGYTYKNFEIVNDDQLPGIAELKKKSTKPKRPSIKTLFDDESATANQPVQGSFLKLLPTQPEVPEKSESQ. 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06274 546 ProSiteProfiles Protein kinase domain profile. 117 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g06274 546 Coils Coil 59 93 - -
Seca7g06274 546 CDD MobB_NDR_LATS-like 51 112 - -
Seca7g06274 546 FunFam Non-specific serine/threonine protein kinase 201 268 - -
Seca7g06274 546 MobiDBLite consensus disorder prediction 1 43 - -
Seca7g06274 546 MobiDBLite consensus disorder prediction 515 530 - -
Seca7g06274 546 PANTHER SERINE/THREONINE-PROTEIN KINASE 28 466 - -
Seca7g06274 546 FunFam Non-specific serine/threonine protein kinase 317 436 - -
Seca7g06274 546 ProSitePatterns Protein kinases ATP-binding region signature. 123 146 IPR017441 GO:0005524
Seca7g06274 546 SUPERFAMILY Protein kinase-like (PK-like) 92 471 IPR011009 -
Seca7g06274 546 Gene3D Phosphorylase Kinase; domain 1 115 447 - -
Seca7g06274 546 Gene3D Transferase(Phosphotransferase) domain 1 201 436 - -
Seca7g06274 546 Pfam Protein kinase C terminal domain 437 481 IPR017892 GO:0004674|GO:0005524|GO:0006468
Seca7g06274 546 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Seca7g06274 546 MobiDBLite consensus disorder prediction 498 513 - -
Seca7g06274 546 SMART serkin_6 117 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g06274 546 FunFam Non-specific serine/threonine protein kinase 88 200 - -
Seca7g06274 546 Pfam Protein kinase domain 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g06274 546 MobiDBLite consensus disorder prediction 1 27 - -
Seca7g06274 546 CDD STKc_NDR_like 115 482 - -
Seca7g06274 546 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 491 IPR000961 GO:0004674|GO:0005524|GO:0006468
Seca7g06274 546 MobiDBLite consensus disorder prediction 498 546 - -
Seca7g06274 546 SMART pkinase_C_6 419 483 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06274 Seca-Chr7 163840152 163848096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06274 3 544 AGC Kinase Gene Family AT3G23310 83.303 0.0 916
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Seca7g06274 Pkinase 3e-65 CL0016