Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06271 ATGGCAAACAACTTCTTTAACTTCAGTCAGTTTTATTTTCTCAACTATGTACAACGCTTTCAGCATGACAATCTGAATGAAAATTTTGTATGCAGATTGTGTGACCAAGTTTTCACCACCTATCAATCAATCATAACCCATCTCGAGTCTCATCATATTCCTCGGGAAAACCTTCCCATAGGAATTCTAAACAATATCAACCCTCAGAGAGAATTGATTCCTGGCCCTTTACAACCTAATTTTTCTAGACCAACATTATTGCCAGAAACTAGAAACTTTGTTAATAGCAGGGTTTTCCAGGCACCTCCACGACCACCTGTGGTGATGCCTCGACCTAGAACAAACCCATTTCCTTATGCCAACCTGCAGGTTGCTGCTTCCCAACCACTCTTTCTTCCACCACAGGTTATGCCATCTAGTGGTAGGATTGGGATCGGTGTTACTGATATGTCCCACCAAGGGCGGATGGAAGTGTCTCCAATTGATGGAACTAAACCATATATCGACCTGTTGGATAAACCCATTGATAACAATATGGTCGATAATTTGGCTAACATCAATGATGACACATTGGATTTGGCTTTAAGGCTCTAG 594 0.4141 MANNFFNFSQFYFLNYVQRFQHDNLNENFVCRLCDQVFTTYQSIITHLESHHIPRENLPIGILNNINPQRELIPGPLQPNFSRPTLLPETRNFVNSRVFQAPPRPPVVMPRPRTNPFPYANLQVAASQPLFLPPQVMPSSGRIGIGVTDMSHQGRMEVSPIDGTKPYIDLLDKPIDNNMVDNLANINDDTLDLALRL. 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06271 197 ProSiteProfiles Zinc finger C2H2 type domain profile. 29 56 IPR013087 -
Seca7g06271 197 ProSitePatterns Zinc finger C2H2 type domain signature. 31 52 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06271 Seca-Chr7 163797112 163797705 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Seca7g06271 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06271 - K09228 pvu:PHAVU_007G056300g 139.813