Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06259 ATGGGGTTCAGATATCTTCGTCTCAAAGTCAAGGCATTTCGGCTGAAACGGTTTCTGCTACTGCTAGGACTTGGAGGCAGAAAGAGAAAGCACTTGCCAGCAAATAAGCCTTCATGGATGATGCCAATAACACATGGTTATTATGTGGTAGAGCATCATATGATCAGAGATGGTTCTGATGACTCAGACCTTGATTCAGTTGTGGTACAAAGAGAGCAAATTGATCATACAGAATTGTGGTATTTTGGAATCTTTGATGCACTAATTGGAGAAAGAGTCACCAAGTACATGCAATCCCATTTCTTTGCCAAGAAGCTTCAAGAGGCTCATATAAGGAGAAAAAGCAAAGATACACTGAAGAGAGCTTATCTTGGTGTAAGGACAAAGATAAGAGAGGAACACAGATCAGAAGAGACATGCAGAATGGGTTCAGCATCTGTTATGGTAATCAATGGAGAACAACTTGTAATAGCTAACATGGGAGATTATAGAACTGTTGTGTGTAGAGATGGCATAGCTTATCAAACAACTGGAACATACCAACAATCAGCCAAAAAACATTGGTCTCGCAGACTCTTTGCAGCACTTGAATCAGGAAATGCAATAGGCACAAGGCATTCTAGAGGCTCTGAACTTGTTGTGAGAGGTGAGAGGGTTGATTCTGATACTGAATTTTTGATATTAGCAAGCAATGGCATATGGGAGGTGATGAAGAACCAAGAGGCTGTGAATCTGATCAGCCACATAGAGGATCCACAAGAAGCAGCTGAGTGCTTGGCAAAGGAAGCATTAATTAGGATGAGTAGAAGCAACATCTCATGCTTGATAATTCGCTTTGACTGA 843 0.4116 MGFRYLRLKVKAFRLKRFLLLLGLGGRKRKHLPANKPSWMMPITHGYYVVEHHMIRDGSDDSDLDSVVVQREQIDHTELWYFGIFDALIGERVTKYMQSHFFAKKLQEAHIRRKSKDTLKRAYLGVRTKIREEHRSEETCRMGSASVMVINGEQLVIANMGDYRTVVCRDGIAYQTTGTYQQSAKKHWSRRLFAALESGNAIGTRHSRGSELVVRGERVDSDTEFLILASNGIWEVMKNQEAVNLISHIEDPQEAAECLAKEALIRMSRSNISCLIIRFD. 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06259 280 CDD PP2Cc 81 279 IPR001932 -
Seca7g06259 280 SUPERFAMILY PP2C-like 65 280 IPR036457 -
Seca7g06259 280 ProSiteProfiles PPM-type phosphatase domain profile. 44 279 IPR001932 -
Seca7g06259 280 Pfam Protein phosphatase 2C 81 184 IPR001932 -
Seca7g06259 280 Pfam Protein phosphatase 2C 219 272 IPR001932 -
Seca7g06259 280 Gene3D - 55 280 IPR036457 -
Seca7g06259 280 SMART PP2C_4 51 277 IPR001932 -
Seca7g06259 280 PANTHER PROTEIN PHOSPHATASE 45 278 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06259 Seca-Chr7 163684837 163687339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06259 1 279 PP2C-type Phosphatase Gene Family AT3G23360 48.571 6.22e-85 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06259 K19704 - gmx:100785227 413.69