Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06258 ATGGTGAGGTCCCAAATGAATTTCAAGAGGCTTTCACTCACCGACATCAAGATTGATATAAAGAGGATCCCCAAGAAGAAAGATCTCATTAAAGCCATGGAAGCTGCAGATGTTAAGAACAAGTGGGAGAACAGCTCCTGGGGCAGAAAACTCATTGTTAAAAAAAGAAGGGCAGCCCTCAACGATTTTGACAGGTTTAAGTTAATGTTGACAAAGATCAAGAGGTCAGCTGTTGTTAGGCAAGAACTTGCTAAGCTGAAAAAGAGTGCAGCTTAG 276 0.4167 MVRSQMNFKRLSLTDIKIDIKRIPKKKDLIKAMEAADVKNKWENSSWGRKLIVKKRRAALNDFDRFKLMLTKIKRSAVVRQELAKLKKSAA. 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06258 91 Gene3D - 50 85 - -
Seca7g06258 91 Pfam Ribosomal protein L14 3 75 IPR002784 GO:0003735|GO:0005840|GO:0006412
Seca7g06258 91 SUPERFAMILY Translation proteins SH3-like domain 3 51 IPR008991 -
Seca7g06258 91 Gene3D - 1 44 IPR014722 -
Seca7g06258 91 PANTHER 60S RIBOSOMAL PROTEIN L14 1 89 IPR039660 GO:0003723|GO:0003735
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06258 Seca-Chr7 163679781 163681072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06258 1 91 Cytoplasmic Ribosomal Protein Gene Family AT2G20450 79.121 7.01e-46 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06258 K02875 - gmx:100817659 146.747