Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06218 ATGAGTGAATACCTCAAGCGAGACTACGTCGTTTTGGGAGAGATCGGCCAGGGAAGATTCGGCACCGTTTTCCGGTGCTCTTCCGTGGACTCCGGCGACTCCTTTGCCGTTAAATCAATCGACAAATTGGCCTTAACCGCCGTAGGAGACTCCTTAGACACTCAATGCCTCTTAACAGAGCCCAAAATCCTTCAACTTCTCTCCTCTCACCCTCACATAGTTCAACTCCACAACCTCTACGAGGACGACACGCATCTCCACATGGTTCTTGATCTCTGTTACGAATCGGACTTTCACAATCGGGTCATGTCCGAACCCGAAGCCGCATCCATCATGTACCAGCTCATGCAAGCCGTGGCTCACTGCCACCGCCTCGGCGTGGCGCACCGTGACATAAAACCCGATAACATTCTCTTTGATGAGGAGAATCGGCTAAAGCTAGCCGATCTTGGTTCGGCTGAGGTATTCAAGGAGGGGGAGCTGATCAGTGGGGTGGTGGGTACGCCGCATTACGTGGCGCCGGAGGTACTCGCTGGAAGGGAATACAACGAGAAGGTTGATGTGTGGAGTGCTGGTGTCGTTTTGTATGGAATGTTGGCTGGGTTTCTGCCGTTTCGAGGGGATTCGCCGGTGGAGATTTTTGAGGCTGTTCTTCGAGCCAATTTGAGGTTCCCGAGCAGAGTTTTTTGCTCTGTATCACCGGCGGCCAAGGATCTGCTTCGTAGAATGCTCTGTAAGGATGTTTCTAGAAGGTTCTCTGCAGAACAAGTTCTCAGTGGCACCCATGGTTTAGCATGGCTGAACAGAACATTCCAACAGGGTGAGTGA 828 0.5205 MSEYLKRDYVVLGEIGQGRFGTVFRCSSVDSGDSFAVKSIDKLALTAVGDSLDTQCLLTEPKILQLLSSHPHIVQLHNLYEDDTHLHMVLDLCYESDFHNRVMSEPEAASIMYQLMQAVAHCHRLGVAHRDIKPDNILFDEENRLKLADLGSAEVFKEGELISGVVGTPHYVAPEVLAGREYNEKVDVWSAGVVLYGMLAGFLPFRGDSPVEIFEAVLRANLRFPSRVFCSVSPAAKDLLRRMLCKDVSRRFSAEQVLSGTHGLAWLNRTFQQGE. 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06218 275 PIRSF ILK 4 261 - -
Seca7g06218 275 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Seca7g06218 275 SMART serkin_6 9 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g06218 275 SUPERFAMILY Protein kinase-like (PK-like) 4 259 IPR011009 -
Seca7g06218 275 ProSiteProfiles Protein kinase domain profile. 9 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g06218 275 FunFam Maternal embryonic leucine zipper kinase 1 272 - -
Seca7g06218 275 CDD STKc_CAMK 8 259 - -
Seca7g06218 275 Pfam Protein kinase domain 9 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g06218 275 Gene3D Phosphorylase Kinase; domain 1 1 92 - -
Seca7g06218 275 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Seca7g06218 275 Gene3D Transferase(Phosphotransferase) domain 1 93 273 - -
Seca7g06218 275 PANTHER SERINE/THREONINE-PROTEIN KINASE 6 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06218 Seca-Chr7 163120214 163121749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06218 2 258 EF-hand Containing Proteins AT2G38910 41.887 9.73e-62 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Seca7g06218 Pkinase 8.7e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06218 K08794 - gmx:547731 461.455