Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06217 ATGGGTTTCTTCACAGATGCCTATGATCTCTTTTGCATTTCCCTTGTAACCAAGTTGCTGGGACGGATATATTACACAGATTATACCAAACCAAAGCCTGGTGTTCTTCCTCCTAATGTGCAAGCTGCTGTGACTGGTGTTGCACTATGTGGCACTTTAGCTGGCCAGCTTTTCTTTGGTTGGCTTGGTGACAAGTTGGGAAGAAAAAAGGTTTATGGTATAACACTTATGCTCATGGTAGTGTGTTCCATTGCCTCGGGGCTATCTTTTGGATCTAGTGCAAAGGGTGTCATGGCCACACTTTGTTTCTTCAGGTTTTGGCTTGGGTTTGGGATTGGTGGTGATTACCCTCTTTCTGCTACAATCATGTCTGAATATGCCAACAAAAAGACACGAGGGGCATTTATTGCTGCAGTATTTGCTATGCAAGGATTTGGAATCATGGCTGGTGGAATTGTTGCCTTGATTGTCTCATCTGCATTTGACCACAAATACAAGGTTCCTACTTATCAAGAAGATGCAACAGCATCAATGGTGTTACCTGCCTTTGATTATGTTTGGCGTATCATTTTGATGTTTGGTGCAATTCCAGCTGCTCTTACCTACTACTGGCGTATGAAAATGCCAGAGACAGCTCGTTACACAGCCCTTGTTGCAAAGAATGCAAAACAAGCTGCTTCAGACATGTCTAAGGTGTTACAAGTTGAAATTGAAGCTGAAGAGGACAAGGTGCAGCACTTGATTGAGAGTCAAAACCAAACATTTGGTTTGTTCAGCAAGGAATTTGCTAAACGCCACGGGCTGCACTTGGTAGGAACCACAACTACTTGGTTCTTATTGGACATTGCCTTCTATAGTCAGAACCTTTTCCAAAAGGACATTTTCACTGCCATTGGATGGATTCCTCCTGCAAAAGAAATGAATGCAATCCATGAGGTTTATAGGATTGCAAGAGCACAAACACTTATAGCATTGTGCAGTACTGTGCCAGGGTACTGGTTTACAGTGGCCTTCATTGATTACATGGGCCGTTTCGCCATCCAATTGATGGGTTTCTTCTTCATGACTGTCTTCATGTTTGCCCTGGCTATACCTTATCATCACTGGACCTTGAAGGAAAACAGAATTGGGTTTGTTGTGATGTACTCACTCACCTTCTTCTTCGCCAATTTTGGTCCAAATGCCACCACATTTGTTGTGCCAGCAGAGATTTTCCCAGCAAGGCTAAGATCTACTTGTCATGGAATCTCAGCTGCTGCAGGAAAAGCAGGAGCAATTGTTGGTGCATTTGGATTCTTATATGCTGCACAAAGTACGGACCCTGCCAAGACTGATGCAGGTTACCCAACTGGTATTGGGGTTAAGAACTCTCTCATTATGCTTGGTGTGATCAACTTCTTTGGAATTATATTTACCTTGTTAGTACCAGAATCTAAGGGAAAATCACTAGAGGAGTTGAGTGGGGAGACTGAAGAAGATGGTGCTGAGGCTATAGAGGCAGCAGGGTCTTCTAACATGGCTAAGGATCAGTTGCATGTGCTTAATGCACTTGATGTTGCCAAGACACAATGGTACCATTTCACAGCCATTGTGATTGCTGGGATGGGTTTCTTTACTGATGCCTATGATCTTTTCTGCATCTCCCTTGTCACCAAATTGCTAGGCCGCATATACTACTATGAAGGCCCCACCAAGCCTGGCTCTCTACCATCCAATGTTTCTGCTGCCATCAATGGTGTTGCATTCTGTGGAACCCTTGCAGGCCAGCTTTTCTTTGGCTGGCTTGGTGACAAAATGGGAAGGAAACGTGTATATGGGATGACCCTTATGCTCATGGTGATATGTTCACTTGCTTCTGGTCTCTCTTTTGGAAAAGAACCTAAAGCTGTTATGGCTACCCTTTGCTTCTTCCGTTTCTGGCTTGGATTTGGAATTGGTGGTGACTACCCTCTTTCAGCCACTATCATGTCTGAGTATGCCAACAAAAAGACTCGTGGAGCCTTTATTGCTGCAGTTTTTGCCATGCAAGGTTTTGGAATTTTGGCTGGTGGCATGGTTGCAATTATAGTTTCATCTGCTTTCAGAGCCAAGTACCCTGCTCCAGCATTCCAAGTTGACCCAGTTTTGTCCACAGTTCCACAAGCTGATTATGTTTGGAGGATAATCTTGATGTTTGGTGCACTCCCAGCTCTTCTCACATACTATTGGAGGATGAAAATGCCTGAAACTGCAAGGTACACTGCCTTGAATCTTTTTCAGAAAGACATTTTTAGTGCAATTGGGTGGATTGCAGAAGCTAAAACCATGAGTGCTATTGAAGAGGTTTACAAAATTGCTAGAGCACAGACCCTCATAGCACTTTGCAGCACTGTCCCTGGTTACTGGTTCACAGTGGCACTCATTGATAGGATAGGAAGGTTTGCAATCCAGTTGATGGGGTTTTTCTTCATGACTGTGTTCATGTTTGCCTTAGCCATTCCATACCACCACTGGACCATGAAGGGTAACCAAATTGGGTTTGTTGTCATGTATTCATTCACCTTCTTCTTTGCCAATTTTGGACCAAATGCCACTACGTTTGTGGTGCCAGCAGAGATTTTCCCAGCAAGGCTAAGGTCAACATGCCATGGTATATCAGCAGCAGCAGGGAAAGCTGGGGCAATGGTAGGGGCTTTTGGCTTCTTGTATGCTCAAAATGGCATTGGAGTGAGAAATACGCTTATAATTTTGGGTGTGATTAACTTCTTGGGGATGATGTTTACATTCTTGGTGCCTGAATCTAAAGGAAAATCACTGGAGGAGATATCTGGTGAAGCTGAGGAAGAGACTACTACTGCTACAAGAGAATCAGCATTGGAGGCTGGTCTTCAAGTTTAG 2877 0.439 MGFFTDAYDLFCISLVTKLLGRIYYTDYTKPKPGVLPPNVQAAVTGVALCGTLAGQLFFGWLGDKLGRKKVYGITLMLMVVCSIASGLSFGSSAKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGIMAGGIVALIVSSAFDHKYKVPTYQEDATASMVLPAFDYVWRIILMFGAIPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVEIEAEEDKVQHLIESQNQTFGLFSKEFAKRHGLHLVGTTTTWFLLDIAFYSQNLFQKDIFTAIGWIPPAKEMNAIHEVYRIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQLMGFFFMTVFMFALAIPYHHWTLKENRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSTDPAKTDAGYPTGIGVKNSLIMLGVINFFGIIFTLLVPESKGKSLEELSGETEEDGAEAIEAAGSSNMAKDQLHVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYEGPTKPGSLPSNVSAAINGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVICSLASGLSFGKEPKAVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGMVAIIVSSAFRAKYPAPAFQVDPVLSTVPQADYVWRIILMFGALPALLTYYWRMKMPETARYTALNLFQKDIFSAIGWIAEAKTMSAIEEVYKIARAQTLIALCSTVPGYWFTVALIDRIGRFAIQLMGFFFMTVFMFALAIPYHHWTMKGNQIGFVVMYSFTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAMVGAFGFLYAQNGIGVRNTLIILGVINFLGMMFTFLVPESKGKSLEEISGEAEEETTTATRESALEAGLQV. 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06217 958 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 483 - -
Seca7g06217 958 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 480 IPR020846 GO:0022857
Seca7g06217 958 ProSiteProfiles Major facilitator superfamily (MFS) profile. 529 929 IPR020846 GO:0022857
Seca7g06217 958 CDD MFS_PhT 1 479 - -
Seca7g06217 958 SUPERFAMILY MFS general substrate transporter 1 487 IPR036259 -
Seca7g06217 958 MobiDBLite consensus disorder prediction 933 947 - -
Seca7g06217 958 FunFam Probable inorganic phosphate transporter 1-5 525 760 - -
Seca7g06217 958 Gene3D MFS general substrate transporter like domains 746 952 IPR036259 -
Seca7g06217 958 Gene3D MFS general substrate transporter like domains 525 745 IPR036259 -
Seca7g06217 958 Pfam Sugar (and other) transporter 530 751 IPR005828 GO:0016020|GO:0022857|GO:0055085
Seca7g06217 958 Pfam Sugar (and other) transporter 4 486 IPR005828 GO:0016020|GO:0022857|GO:0055085
Seca7g06217 958 Pfam Sugar (and other) transporter 795 936 IPR005828 GO:0016020|GO:0022857|GO:0055085
Seca7g06217 958 NCBIfam phosphate:H+ symporter 1 489 IPR004738 GO:0005315|GO:0006817|GO:0016020
Seca7g06217 958 Gene3D MFS general substrate transporter like domains 1 502 IPR036259 -
Seca7g06217 958 MobiDBLite consensus disorder prediction 933 958 - -
Seca7g06217 958 FunFam Inorganic phosphate transporter 1-6 1 500 - -
Seca7g06217 958 CDD MFS_PhT 530 928 - -
Seca7g06217 958 SUPERFAMILY MFS general substrate transporter 515 936 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06217 Seca-Chr7 163086231 163097993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06217 750 942 Inorganic Solute Cotransporters AT5G43360 78.155 3.38e-102 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06217 K08176 - gmx:100802890 898.656