Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06210 ATGGAGGAGCATCACAAGGGGAAACATGGAAAGGAGCTGGAGAAAGGAAGGGAAGAGGTCCGGTACCGAGGTGTCCGGCGGCGGCCGTGGGGGAAGTATGCGGCGGAGATAAGAGATCCATCGAAGCAAGGGACAAGGCTGTGGTTGGGGACATTTGATACTGCTGAAGAGGCTGCTAGAGCTTATGATAGAGCAGCTTTTAATTTGAGGGGTCATCTTGCAATTCTGAATTTTCCTAATGAGTACTATTCTCAAATAAGGGGCTCACCACCATATCCACCTCATTTGGCATCTCCTAATTCTTCTTCTTCTGCCAGTACTTCTCAGAGTCATAGGCATGTCTTTGAGTTTGAGTGTTTGGATGATAAGGTGTTGGAGGAACTTCTTGAGTCAGAGGACCAGAAGAAGAAAAAGAAGTGA 420 0.4738 MEEHHKGKHGKELEKGREEVRYRGVRRRPWGKYAAEIRDPSKQGTRLWLGTFDTAEEAARAYDRAAFNLRGHLAILNFPNEYYSQIRGSPPYPPHLASPNSSSSASTSQSHRHVFEFECLDDKVLEELLESEDQKKKKK. 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06210 139 Gene3D AP2/ERF domain 20 80 IPR036955 GO:0003700|GO:0006355
Seca7g06210 139 MobiDBLite consensus disorder prediction 1 21 - -
Seca7g06210 139 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Seca7g06210 139 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Seca7g06210 139 FunFam Ethylene-responsive transcription factor 2 20 80 - -
Seca7g06210 139 ProSiteProfiles AP2/ERF domain profile. 21 79 IPR001471 GO:0003700|GO:0006355
Seca7g06210 139 SMART rav1_2 21 85 IPR001471 GO:0003700|GO:0006355
Seca7g06210 139 SUPERFAMILY DNA-binding domain 21 80 IPR016177 GO:0003677
Seca7g06210 139 Pfam AP2 domain 21 72 IPR001471 GO:0003700|GO:0006355
Seca7g06210 139 CDD AP2 21 80 IPR001471 GO:0003700|GO:0006355
Seca7g06210 139 PANTHER DNA-BINDING DOMAIN 15 135 IPR044808 GO:0003700|GO:0009873
Seca7g06210 139 MobiDBLite consensus disorder prediction 87 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06210 Seca-Chr7 162923139 162923558 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06210 19 136 AP2-EREBP Transcription Factor Family AT3G23230 69.106 1.10e-52 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Seca7g06210 AP2 3.5e-17 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06210 - - gmx:100793703 178.718