Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06195 ATGTTCGCAGCTGAAATGGTAGCAGGTCTGGCTAATCCTTGGTGGACAGGAGGGTTATCTGGGGTTGACCACCCAGGAACCCATTCACCTGGTGGTGGTGGTTTAAGCAAAATACGCCACACGGACCTTGCAATCCACAGAGATGAAGAAGAAGCAGAAGAAGAATTAGAAGACAACAGAGATGAACCAAAAGAAGGTGCAGTTGAGATTGGAACAAGGAGACCAAGAGGAAGACCACCTGGATCCAAAAACAAACCAAAACCACCCATCTTTGTCACAAGGGACAGTCCAAACGCCCTTAGGAGCCATGTCATGGAGGTAGCTGGAGGGGCTGATATAGCTGACAGTGTAGCCCAATTCGCAAGGAGGCGTCAGCGTGGGGTTTGTGTCCTCAGTGGTAGTGGCTCTGTTGCAAACGTCACTCTCAGACAACCAGCAGCACCTGGTGCTGTTGTAGCACTTCATGGAAGGTTTGAGATTCTATCCCTAACTGGGACATTTCTTCCAGGACCTTCCCCTCCAGGGTCCACAGGACTCACAGTGTATCTTGCTGGAGGACAGGGTCAGGTTGTTGGAGGGAGTGTGGTCGGGTCTTTAGTTGCAGCAGGACCTGTTATGGTCATTGCTGCAACTTTTGCTAATGCAACATATGAGAGACTTCCACTTGATGATGAGGATGAAGGGCCTAGTTCTGCTGTGCAAGGATCGCCGGGAACGGTGGCGGGGATTGGAGGACATCAGTTGCAGCAGCAGCAGCCTGGAGGAGGGCTTCCAGATCCATCATCTCTTCCTTTGTATAATTTGCCACCGAATCTGTTGCCTAATGGAGGAGGACAGGTGGGACATGAGGCTCTTGCTTGGGCTCATGGAAGACAACCTTACTAA 885 0.5096 MFAAEMVAGLANPWWTGGLSGVDHPGTHSPGGGGLSKIRHTDLAIHRDEEEAEEELEDNRDEPKEGAVEIGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVAGGADIADSVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGTFLPGPSPPGSTGLTVYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFANATYERLPLDDEDEGPSSAVQGSPGTVAGIGGHQLQQQQPGGGLPDPSSLPLYNLPPNLLPNGGGQVGHEALAWAHGRQPY. 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06195 294 Gene3D - 100 228 - -
Seca7g06195 294 CDD DUF296 101 184 IPR005175 -
Seca7g06195 294 FunFam AT-hook motif nuclear-localized protein 100 227 - -
Seca7g06195 294 PIRSF ESCAROLA 30 294 IPR014476 GO:0003680
Seca7g06195 294 MobiDBLite consensus disorder prediction 49 95 - -
Seca7g06195 294 Pfam Plants and Prokaryotes Conserved (PCC) domain 101 213 IPR005175 -
Seca7g06195 294 MobiDBLite consensus disorder prediction 221 270 - -
Seca7g06195 294 MobiDBLite consensus disorder prediction 232 257 - -
Seca7g06195 294 SUPERFAMILY AF0104/ALDC/Ptd012-like 97 225 - -
Seca7g06195 294 ProSiteProfiles PPC domain profile profile. 97 235 IPR005175 -
Seca7g06195 294 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 51 289 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06195 Seca-Chr7 162762521 162764731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06195 10 294 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 61.301 5.48e-101 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06195 - - gmx:100798994 352.443