Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06101 ATGACCATCTCAATGCTAATGTGCAGACTTAGACAACCCATAATAAACGTTCCTTGCAGTGGCAAAAAATTGAATGTGAGGCAGATTCAGAAAGAGAAAGTAGTGTTGGTGATGGGAGCAACAGGAACAGGAAAGTCAAGGCTTTCCATTGACTTAGCCACCTGTTTTCCATCAGAAATCATCAACTCTGACAAGATTCAAATCTACCAAGGTCTTGACATTGTGACAAACAAAATCTCCGAGGAAGAACAACGTGGGGTACCCCACCATTTACTAGGAACACAAAATCCCAACACAGAGTTCACAGCCAATGATTTCCGTGACATGTCATCATCAGCTATTGACTCAATCACAAGCAGTGAGCAACTTCCAATCATCGTTGGAGGTTCCAATTCCTACCTTGAGGCCTTAGTTGATGATGATGATTACAAATTCAGATCAAGGTACGATTTTTGCTGCCTCTGGGTGGATGTATCAATGCCTGTTCTTCATTCCTATGTAGCAGAGCGTGTTGATCAAATGGTTAGCAATGGAATGGTGAATGAACTGAGACCCTTTTTCAGTCCTAATGGGGATTACTCAAGAGGGATTAGAAAAGCCATTGGGGTGCCTGAATTTGATGAGTATTTTAGGAATGAAGCATTTGTTGATGAGGAAACAAGAAAGGTGTTATTGGAGAAAGCAATTAGTGAAATGAAGTTGAATACTTGTAAGTTAGCTAGGAAACAGTTGGGGAAGATTCATAGGTTGAGGAATGTTAAGAGATGGAAGATTCATCGCTTAGATGCCACACCTGTGTTTAGAAAACAAGGACAAGAAGCAGAGGAAACTTGGAGGAAGATGGTTGCAGAGCCTAGTGCTATGATTGTTGCTAACTTTCTGTATAATTCAAACACTGCAAATGTTGTTTCTGATCTTAGAATGCCAGCTTCTAAGACTGTTATGGCTGCAGCAACATGCTAG 963 0.4091 MTISMLMCRLRQPIINVPCSGKKLNVRQIQKEKVVLVMGATGTGKSRLSIDLATCFPSEIINSDKIQIYQGLDIVTNKISEEEQRGVPHHLLGTQNPNTEFTANDFRDMSSSAIDSITSSEQLPIIVGGSNSYLEALVDDDDYKFRSRYDFCCLWVDVSMPVLHSYVAERVDQMVSNGMVNELRPFFSPNGDYSRGIRKAIGVPEFDEYFRNEAFVDEETRKVLLEKAISEMKLNTCKLARKQLGKIHRLRNVKRWKIHRLDATPVFRKQGQEAEETWRKMVAEPSAMIVANFLYNSNTANVVSDLRMPASKTVMAAATC. 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06101 320 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 141 IPR027417 -
Seca7g06101 320 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 160 258 - -
Seca7g06101 320 Pfam IPP transferase 67 140 - -
Seca7g06101 320 Pfam IPP transferase 145 244 - -
Seca7g06101 320 FunFam Adenylate isopentenyltransferase 5, chloroplastic 160 258 - -
Seca7g06101 320 FunFam Adenylate isopentenyltransferase 5, chloroplastic 31 182 - -
Seca7g06101 320 Gene3D - 31 294 IPR027417 -
Seca7g06101 320 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 31 293 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06101 Seca-Chr7 161506886 161507848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06101 147 294 C2H2 Transcription Factor Family AT2G27760 33.714 1.67e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06101 K10760 - gmx:100803964 494.967