Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06078 ATGAAGCAACATTGTGTATATGACTTCAAATGGATCTTTGTCTATCTAGTTCTTTTTCCGTCTTTGGTTTTTGGTGATTGTACATGTGAACCAGAGGATAACTCTGGTGACAAAAGCTTGGCTCGGAAATACAAAATAGCATCTCTTGTTATAATTTTGGTTGCAAGTGCATTAGGTGTAACAATTCCAATACTTGGGAAAACTTTCTCAGCATTACGACCTGAGAAGGACTTTTTCTTCATCATCAAAGCCTTTGCAGCAGGGGTTATATTGTCCACTGGTTTCATCCATGTATTGCCTGATGCTTTTGAGAAATTGACATCTCCTTGTCTTAGTGATCATCCATGGGGAGATTTTCCATTCACAGGATTTATGGCAATGTTATCCGCTATGGGAACACTTATGATTGATTCTTTTGCAACTGCATATTTTACTAAGTCTCACTTTAATGACAAGGGTCAAGTTGTAGACGAAGAAAAGGTGGAGGTTCAAAATCATACCCATGGTCATGCTCATGGTTCGATTTCATCTAGTTCAAAAGATCTCATTCGTCGTCGTGTTATTTCTCAGGTGTTGGAGTTAGGGATTTTGGTGCATTCAGTGATAATAGGGGTCTCTTTAGGTGCATCTGAGAGTCCTGAGGGCTGA 648 0.3935 MKQHCVYDFKWIFVYLVLFPSLVFGDCTCEPEDNSGDKSLARKYKIASLVIILVASALGVTIPILGKTFSALRPEKDFFFIIKAFAAGVILSTGFIHVLPDAFEKLTSPCLSDHPWGDFPFTGFMAMLSAMGTLMIDSFATAYFTKSHFNDKGQVVDEEKVEVQNHTHGHAHGSISSSSKDLIRRRVISQVLELGILVHSVIIGVSLGASESPEG. 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06078 215 PANTHER ZINC/IRON TRANSPORTER 41 213 - -
Seca7g06078 215 Pfam ZIP Zinc transporter 44 213 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06078 Seca-Chr7 161231547 161234108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06078 26 212 Inorganic Solute Cotransporters AT3G12750 56.784 1.87e-71 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06078 K14709 - qsu:112037227 265.003