Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06074 ATGGCTGCGCCACTAGGTAGTAGGCTTCAAAGCATGTTGCAGGATGCGGTGCAATCTGTTCAGTGGACTTATAGCCTCTTCTGGCAACTTTGCCCACAACAAGTGATTCTGGTTTGGGGTGATGGGTACTACAACGGAGCAATTAAGACTCGGAAGACAGTGCAACCAATGGAGGTTAGTGCTGAGGAAGCATCTCTCCAGAGAAGCCAGCAACTTAGAGAACTCTATGAATCATTATCCGCCGGAGAAACAAACCCACCCACTCGCCGGCCTTGTGCTGCCTTGTCGCCGGAGGACTTAACAGAATCTGAATGGTTCTATTTGATGTGTGTCTCATTCTCCTTTCCTCCTGGTGTCGGGTTGCCGGGAAAGGCATATGCAAGGAGGCAGCACGTATGGCTCACTGGTGCGAACGAGGTGGACAGCAAAACATTTTCAAGAGCAATTCTAGCCAAGGTACTCCAATTAGCACATAATCAACACTGA 486 0.4938 MAAPLGSRLQSMLQDAVQSVQWTYSLFWQLCPQQVILVWGDGYYNGAIKTRKTVQPMEVSAEEASLQRSQQLRELYESLSAGETNPPTRRPCAALSPEDLTESEWFYLMCVSFSFPPGVGLPGKAYARRQHVWLTGANEVDSKTFSRAILAKVLQLAHNQH. 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06074 161 PANTHER TRANSCRIPTION FACTOR TT8 7 152 - -
Seca7g06074 161 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 9 154 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06074 Seca-Chr7 161175303 161178971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06074 1 152 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 75.000 2.81e-81 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06074 - - lja:Lj5g3v0975560.1 300.056