Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06050 ATGCCAAGCACAAGAAATCTGAAGCACCTCAATCTCAACATGTGTTTCTCAAATTCCACTACTCCAGAATCAAAATCCCCTCCTACAAGCCCCATTCATGCCACTTCCTCTCCATATGCATCATCACCGTCAATAATGATCAAGAATTTCAACTCACTCTATGACCCTATAGCTACCTCCTCAACCTTTGACAACTTCTCTTCCTTCACCACAACCACAACCTCCACTTCCTCCGAACCCGAACCTGCTGACTTCGCCGCAGCCTTTGCCTCCCAACGCTTCTTCTTCACCTCCCCTGGCCCTTCCAACTCTCTCACTAACTGCAACAAACACTCCTCATCACCATTGATGGCCACAAACACAAACGATGATAATCATATTCATAATCCAAATGGATCAGAAAGTGAAAAGAAGAGCAAGAAGGCGTTGTTCAATGGAAGCGTGGCGGTGTCGACATACTCGCCGGATCCGTATCTGGATTTCCGGCGGTCGATGCAGGAGATGGTGGAGGCGCGTCCTGAACTAATGGATGTGAAGTCAAATTGGAAGATATTGCACGAGCTTCTTCTCTGTTACCTTGCGCTGAATCCAAAGAGCACACACAAGTTCATTCTCGGTGCTTTTGCTGATCTCCTTGTTAGCCTCATGCCATTCTAG 657 0.4718 MPSTRNLKHLNLNMCFSNSTTPESKSPPTSPIHATSSPYASSPSIMIKNFNSLYDPIATSSTFDNFSSFTTTTTSTSSEPEPADFAAAFASQRFFFTSPGPSNSLTNCNKHSSSPLMATNTNDDNHIHNPNGSESEKKSKKALFNGSVAVSTYSPDPYLDFRRSMQEMVEARPELMDVKSNWKILHELLLCYLALNPKSTHKFILGAFADLLVSLMPF. 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06050 218 MobiDBLite consensus disorder prediction 106 139 - -
Seca7g06050 218 MobiDBLite consensus disorder prediction 106 128 - -
Seca7g06050 218 MobiDBLite consensus disorder prediction 18 38 - -
Seca7g06050 218 ProSiteProfiles OVATE domain profile. 150 214 IPR006458 -
Seca7g06050 218 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 51 215 IPR038933 GO:0045892
Seca7g06050 218 NCBIfam uncharacterized plant-specific domain TIGR01568 148 216 IPR006458 -
Seca7g06050 218 Pfam Transcriptional repressor, ovate 154 215 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06050 Seca-Chr7 160809684 160810340 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Seca7g06050 Ovate 3.4e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06050 - - aprc:113871147 242.662