Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06036 ATGGGTAACGTCGAGGACTATGCGTACCCTTCAGCCATGAACGTTGAGGAGAGCGCACACCGTGTGGCGGTTCCACCGCCTCAGCCGTTTTTCAAGTCACTAAAGTACTCTCTGAAGGAGACTTTTTTTCCAGATGACCCTTTGAGGCGGTTTAAGAACCAACCAGCCTCCAAGAAGTTTGTGCTAGGCCTTCAGTACTTCTTCCCAATCTTCGAGTGGGCACCAAACTACACCTTTCAGTTCTTGAAATCCGACCTCATAGCTGGCATCACCATCGCTAGCTTGGCTATTCCTCAAGGCATCAGCTATGCCAAGCTCGCCAACTTGCCTCCAATTCTTGGACTATATTCTAGCTTTATACCACCGTTGATTTATGCGATGATGGGTAGCTCAAGGGATTTGGCAGTGGGGACTGTGGCCGTTGGATCTCTTCTCATGGGTTCCATGTTGGCGAATGAGGTGAATCCCAACCAAAACCCAAAGCTTTTCCTCCACCTTGCTTTCACAGCTACCTTCTTTGCTGGAATTTTGCAGGCTGCATTGGGTTTGTTCAGGTTAGGGTTTATCGTGGATTTCCTGTCACATGCAACCATAGTAGGGTTCATGGGAGGAGCAGCCACAGTGGTTTGTCTGCAGCAGCTAAAATCGATTCTTGGCCTTGAGCATTTCACTCATGCGGCTGATCTCGTCTCAGTCATGCGCTCTGTTTTTACTCAAATTCACGAGCAGTGGAGGTGGGAAAGCGCCGTGTTAGGATGTTGCTTCATTTTCTTCCTCCTTATCACAAGATACTTCAGCAAAAAACAACCGAAGTATTTTTGGGTGTCAGCGATGGCGCCGTTGACGTCCGTTATATTGGGAAGTCTCCTGGTTTATTTCACTCACGCTGAGAATCACGGCGTTCAAGTGATAGGAAATTTGAAGAAGGGGCTAAATCCACTATCTCTCACAGATTTGGTATTTGTGTCGCCTTATATGAACACGGCTATCAAGACAGGCCTTGTTGTTGGCATTATAGCACTAGCGGAAGGAATAGCAGTGGGAAGAAGCTTTGCAATGTTTAAAAATTACCATATTGATGGCAACAAAGAGATGATAGCTATTGGGACCATGAACATAGTTGGTTCTTTCACCTCTTGCTACCTCACAACAGGGCCATTTTCTCGTTCAGCCGTGAACTATAATGCTGGATGCAAGACTGCAGCATCCAACATTGTGATGTCAATTGCAGTCATGTTGACATTGTTATTCCTAACACCTTTGTTCTATTACACTCCTCTGGTGGTGCTATCAGCCATAATCGTATCTGCAATGCTTGGCCTCATAGATTATCAAGCAGCCATCCATCTGTGGAAGATTGACAAATTTGATTTTGTCGTGTGCATGAGTGCATATATTGGCGTGGTCTTTGGCAGTGTTGAAATTGGCTTAGTTATAGCTGTTGCAATATCTGTACTTCGGATACTACTATTTGTTGCAAGGCCAAGGACATTTGTTTTGGGCAACATTCCAAATTCTGTAGTATACAGAAATGTTGAGCAATATCCAAATGCAAAACATGTTCCTGGAATCCTAATTCTAGAGATTGATGCACCATTTTACTTTGCCAATTCAAACTATTTAAGAGAAAGGATCACAAGGTGGATTGATGAAGAGGAAGACAGAATTAAAGCTACAGGGGAAACATGTTTGCAGTATGTTATAATGGATATGAGTGTTGTTGGGAACATTGATACAAGTGGAATAAGCATGCTTGAAGAGGTCAAGAAAGTTGCAGATAGAAGAGGGCTACAACTTGTTTTGGTCAATCCTGGAAGCGAGGTGATGAAGAAACTAAACAAAGCTAACTTCCAAAAGGATATAGGGCAAAAATGGATCTATCTTACAGTTGAAGAGGCTGTTGGAGCATGCAACTTTATGCTCCATTCATGCAAAACGAATCTCAATAAAGATGGATCAGGGGGTTGGAACAACGTCTGA 1980 0.4379 MGNVEDYAYPSAMNVEESAHRVAVPPPQPFFKSLKYSLKETFFPDDPLRRFKNQPASKKFVLGLQYFFPIFEWAPNYTFQFLKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMGSMLANEVNPNQNPKLFLHLAFTATFFAGILQAALGLFRLGFIVDFLSHATIVGFMGGAATVVCLQQLKSILGLEHFTHAADLVSVMRSVFTQIHEQWRWESAVLGCCFIFFLLITRYFSKKQPKYFWVSAMAPLTSVILGSLLVYFTHAENHGVQVIGNLKKGLNPLSLTDLVFVSPYMNTAIKTGLVVGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAIGTMNIVGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIVMSIAVMLTLLFLTPLFYYTPLVVLSAIIVSAMLGLIDYQAAIHLWKIDKFDFVVCMSAYIGVVFGSVEIGLVIAVAISVLRILLFVARPRTFVLGNIPNSVVYRNVEQYPNAKHVPGILILEIDAPFYFANSNYLRERITRWIDEEEDRIKATGETCLQYVIMDMSVVGNIDTSGISMLEEVKKVADRRGLQLVLVNPGSEVMKKLNKANFQKDIGQKWIYLTVEEAVGACNFMLHSCKTNLNKDGSGGWNNV. 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06036 659 Gene3D STAS domain 494 639 IPR036513 -
Seca7g06036 659 SUPERFAMILY SpoIIaa-like 516 637 IPR036513 -
Seca7g06036 659 Pfam Sulfate permease family 82 463 IPR011547 GO:0016020
Seca7g06036 659 CDD STAS_SulP_like_sulfate_transporter 515 630 - -
Seca7g06036 659 Pfam STAS domain 515 633 IPR002645 -
Seca7g06036 659 ProSiteProfiles STAS domain profile. 514 637 IPR002645 -
Seca7g06036 659 ProSitePatterns SLC26A transporters signature. 111 132 IPR018045 GO:0008271|GO:0008272
Seca7g06036 659 NCBIfam sulfate permease 69 633 IPR001902 GO:0016020|GO:0055085
Seca7g06036 659 FunFam Sulfate transporter 31 494 640 - -
Seca7g06036 659 PANTHER SULFATE TRANSPORTER 31 644 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06036 Seca-Chr7 160618774 160625712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06036 20 647 Inorganic Solute Cotransporters AT4G02700 68.521 0.0 903
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06036 K17471 - gmx:100791091 1145.18