Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06034 ATGGAGCAGTATGAAATTCTAGAACAGATTGGCAAAGGTTCATTTGCTTCTGCTCTGCTTGTCAGGCACAGGCATGAAAACAAAAAGTATGTTCTCAAGAAGATCCGCCTTGCCCGCCAGACTGACAGAACCCGTAGATCTGCCCACCAGGAGATGGAGCTTATCTCTAAAGTTCGAAATCCATTTATTGTAGAGTATAAAGATTCCTGGGTAGAAAAGGGTTGTTTTGTATGTATTGTTATTGGCTATTGTGAAGGAGGAGACATGGCTGAAGCTATTAAAAAGGCTAATGGTGTTCATTTTCCTGAAGAGAGGCTTTGTAAGTGGCTTGTTCAACTGCTGATGGCACTGGATTACTTGCATGCAAATCATATTCTTCATCGTGATGTCAAGGTGAATGATTTCTCTGAGTTCAATCACTGA 423 0.4137 MEQYEILEQIGKGSFASALLVRHRHENKKYVLKKIRLARQTDRTRRSAHQEMELISKVRNPFIVEYKDSWVEKGCFVCIVIGYCEGGDMAEAIKKANGVHFPEERLCKWLVQLLMALDYLHANHILHRDVKVNDFSEFNH. 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06034 140 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Seca7g06034 140 Gene3D Transferase(Phosphotransferase) domain 1 80 135 - -
Seca7g06034 140 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 131 - -
Seca7g06034 140 SUPERFAMILY Protein kinase-like (PK-like) 1 132 IPR011009 -
Seca7g06034 140 SMART serkin_6 4 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g06034 140 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Seca7g06034 140 ProSiteProfiles Protein kinase domain profile. 4 140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g06034 140 FunFam Serine/threonine-protein kinase Nek2 1 83 - -
Seca7g06034 140 Pfam Protein kinase domain 4 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06034 Seca-Chr7 160571072 160572830 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06034 1 135 AGC Kinase Gene Family AT1G48490 26.389 1.55e-13 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Seca7g06034 Pkinase 5.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06034 K08857 - gmx:100810347 266.929