Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06022 GTTTTTTCTGCCACAATTCCCTTCGCTCACGGGGAATCATCTACATGCTTGACGGTCTACAGGAGCGGCGGTGCTCCGGCGGTGTTCAAATCCCCAAAATGCCCCCGCTGGAAGCTCTCCGATTACGATTCTCCCCCCGAAACCACCGCGCGTTGCCAGTCCGCCGTGCTCCAGGGCCGCAGAAACTCTCAAGAGGATCGCACTCTTTGCGTCCTCGATCTTCGCATTCCCTTCCCCAGTGCGGTCGGGATCAAGGAGGCTGTGGTTGGGATTATGGCTGTTTTCGATGGTCATAACGGCGCAGAAGCTAGTGAGATGGCATCGAAACTTTTGGTGGAGTATTTCGTTCTGCATACTTATTTTCTCCTTGATGCCACGTATTCTGTTGTATCCAAGACGTCGACAGGAACATTGCTTAACAAGAGAGATCCTGACCACGTAAATATATTGCGTAGAGGGAAAGAGATTCTAGGTTGGCAATGGCATGAACTGCATCCTGAAAGAAATATTTTTTCCAGGTTTCAGAATATATTTTCTGCAAATATTGATGATACTTTTCACTTGGAAATTTTGAAAGAAGCTTTGTTGAGAGCGATCCATGATATTGATGCAAAATTTTCTGAGGAAGCCTTTAGAAATAGTCTTCATTCAGGATCTACGGCAGCCGTTGTATTGGTTGCAGATGATAAAATTTTGGTTGCCAATATTGGAGACTCTAAGGTCTTCTTGTGCTCAGAAAATTTTCAGTCTCCTAGAGAGGCTAAAGCCTCATTGTTAAAGCTATACAGGCAGAAAGAGTATGAAGGTTCTGTTTCCGTGTGGGATCGTGAAAAGTACAGATTGGCTTCTTCCCACGGACTCACTCATTTTGCAGTAAAGGAATTGACCAGTGATCATCATCCTGACAGAGACGATGAAAGAATTCGAGTGGAATCATCTGGTGGTCAAGTTCTAAATTGGGGTGGTTTACCTCGTGTAAATGGTCAGCTGGCTATTACACGGGCTATTGGTGACGTGTTCTTTAAAAGTTATGGTGTTATATCTACACCAGAAGTGACTGATTGGCAACCTCTGACTGCTAATGATAGCTATTTGGTGGCTGCATCTGATGGTGTATTTGAGAAGACGAGTGTGCAGGATGTCTGTGATTTGTTGTGGGAAATACACCGTTACAGTAGCATGAGATCGGAGTGTACCCCTTCATCTTCCTACTCATTGGCAGATTTTATTGTTAATACTGCCTTCAAAAAGGGCAGTGTGGACAATATGGCAGCAGTTGTCGTTCCTCTAGAATCTGCCAAATCTACTGCAAAGCAGCCAAACAGTTTGAGAGTTGTAGGTGAAGAATGCAACAAGATGCATGTGTTGGCGAGCAAGCTACCTTGA 1386 0.4488 VFSATIPFAHGESSTCLTVYRSGGAPAVFKSPKCPRWKLSDYDSPPETTARCQSAVLQGRRNSQEDRTLCVLDLRIPFPSAVGIKEAVVGIMAVFDGHNGAEASEMASKLLVEYFVLHTYFLLDATYSVVSKTSTGTLLNKRDPDHVNILRRGKEILGWQWHELHPERNIFSRFQNIFSANIDDTFHLEILKEALLRAIHDIDAKFSEEAFRNSLHSGSTAAVVLVADDKILVANIGDSKVFLCSENFQSPREAKASLLKLYRQKEYEGSVSVWDREKYRLASSHGLTHFAVKELTSDHHPDRDDERIRVESSGGQVLNWGGLPRVNGQLAITRAIGDVFFKSYGVISTPEVTDWQPLTANDSYLVAASDGVFEKTSVQDVCDLLWEIHRYSSMRSECTPSSSYSLADFIVNTAFKKGSVDNMAAVVVPLESAKSTAKQPNSLRVVGEECNKMHVLASKLP. 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06022 461 CDD PP2Cc 51 430 IPR001932 -
Seca7g06022 461 SMART PP2C_4 43 428 IPR001932 -
Seca7g06022 461 Gene3D - 47 439 IPR036457 -
Seca7g06022 461 SUPERFAMILY PP2C-like 50 431 IPR036457 -
Seca7g06022 461 Pfam Protein phosphatase 2C 192 423 IPR001932 -
Seca7g06022 461 ProSiteProfiles PPM-type phosphatase domain profile. 51 430 IPR001932 -
Seca7g06022 461 PANTHER PROTEIN PHOSPHATASE 47 429 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06022 Seca-Chr7 160454793 160457010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06022 106 453 PP2C-type Phosphatase Gene Family AT3G63320 51.724 3.85e-113 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06022 - - gmx:100781476 754.592