Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06009 ATGACGACGGGTTTAGTAGGCGATCAGAACCTGGAAAAACACATTCACAAACAGATGGGGTGCATGGCAGGTTTCCTTCAGATCTTCGATCGCCACCAGATTCTCTCCGGAAAACGCATCTACTCCGCCAAAAGACTCCCTCTCCCTCCCGTAGCACCGGATTCCTCGCCGGAATCAGAGAAACACGGTGAATCTCCGGCGCGCCCAGCACCTTCCCCTGCAAGAGAGGTCCAATCTGAAGCGAAGGTGAACCTTCCCGCACTTCCCGTTCTCGAATTCAAGGAAGGCACCAGGTCTTCATGGAAGTTCTCCCGAGAGGCTCCCAGGCTCTCTCTTGATAGCAGAGCCGTAGTGGATGCTAAAGGAGGCCTTCACCCCAGAGAGATCCCAACCAAAACCACTATCCCCACCGAAAACGACGGAGACAAACAGCGTCGTTCCACCAGCGTGATCGCCAGGCTCATGGGGCTAGAGCCATTACAGGATTCGGATCCTGAATCGGGTGCGAAGCTCCGAAGATCCGCGTCGGAGTCGAGAGTCTCCAGAGATCTGCCACAGTGTCGCTTCTTGGAGTCCAAGCTAAACAATTTTCAGTTGCAGCCAAACTCTGAACATAGCAATGTGGCCCAGGAGAGTAATGTGAATGTCAATGTTGTTTCAGCTGCTATGGATAATCGATTATCCAATGGCAGAGCTACAGAGACAGGCAGAGGTCCCATTCCCCTGAGGCAAAGGGGAACAATGACACAAAAGAAGAGTTTCTATGACTCTGTTGACTTCTTCCCTGAACCGAAGGACACCGTTTCCATCTATGGAGTGATTGAGAAGAGGCTCAGGATGCGAGGAATTAACCAACCTTCTCAGGATCTCCACACTCTTAAGAATATCTTGGAGGCTCTGCAGCTCAAAGGCCTTCTTCATTCCGACAAACCCAACCATTCTCCTATCGTCGTCATGAAACCGACCAGATCTTCCGGTCCCTTGAACCGAACCGGAAATGATTCTCCACCTCCACACTCAACTCTCCGGTCCAGTCCTCGGGCTTGCCGGAGCCCAAGCCCGAGCCATACCGGTGAGACTGACCGGAGCATAAGGACTCAATCCAGAGCCAAAAACTCGAGCCCGAACCGGAGAAGGGTCCCAAATGTGGAGACGCATAGGAAAGTGAGTAATGACGGTGTTGATTCGAGAAGGGTGTCTCCGGTTAATTCGCCCAAGATAAGCTCAAGAAGAAATGCAACAACCGGTCAGGTTGTGACAAGTGGATCGCCCAGGATGAGAAAAGTGATTGATCCTAAGGTGAAGGCAGAGGATGAAATATCCACCGTTTCAGAGAATAGCTTCAGCACCTCTTCACATACAGATACAGAGAGGTACAAGTTGGAAGAGTACAAGGAAGGGAGGAATCTGCTGGATAGGTGTGATAAGCTGCTCAACAGTATAGCGGAGATAACAGCAGTGAACGAGTTGCAACCGAGTCCTGTATCGGTGCTTGACTCATCATTCTACAGGGATGAGTGGTGTTCACCTTCCCCAATAACCAAACGGTGCATTGATTACAAAGGTGAGTGA 1572 0.5095 MTTGLVGDQNLEKHIHKQMGCMAGFLQIFDRHQILSGKRIYSAKRLPLPPVAPDSSPESEKHGESPARPAPSPAREVQSEAKVNLPALPVLEFKEGTRSSWKFSREAPRLSLDSRAVVDAKGGLHPREIPTKTTIPTENDGDKQRRSTSVIARLMGLEPLQDSDPESGAKLRRSASESRVSRDLPQCRFLESKLNNFQLQPNSEHSNVAQESNVNVNVVSAAMDNRLSNGRATETGRGPIPLRQRGTMTQKKSFYDSVDFFPEPKDTVSIYGVIEKRLRMRGINQPSQDLHTLKNILEALQLKGLLHSDKPNHSPIVVMKPTRSSGPLNRTGNDSPPPHSTLRSSPRACRSPSPSHTGETDRSIRTQSRAKNSSPNRRRVPNVETHRKVSNDGVDSRRVSPVNSPKISSRRNATTGQVVTSGSPRMRKVIDPKVKAEDEISTVSENSFSTSSHTDTERYKLEEYKEGRNLLDRCDKLLNSIAEITAVNELQPSPVSVLDSSFYRDEWCSPSPITKRCIDYKGE. 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06009 523 MobiDBLite consensus disorder prediction 46 80 - -
Seca7g06009 523 MobiDBLite consensus disorder prediction 307 423 - -
Seca7g06009 523 MobiDBLite consensus disorder prediction 324 379 - -
Seca7g06009 523 MobiDBLite consensus disorder prediction 396 422 - -
Seca7g06009 523 MobiDBLite consensus disorder prediction 380 394 - -
Seca7g06009 523 PANTHER LONGIFOLIA PROTEIN 1 61 IPR033334 GO:0051513
Seca7g06009 523 MobiDBLite consensus disorder prediction 165 179 - -
Seca7g06009 523 MobiDBLite consensus disorder prediction 124 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06009 Seca-Chr7 160227714 160230377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06009 101 520 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 34.588 4.94e-41 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06009 - - lja:Lj5g3v1014900.1 661.373