Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g05987 | ATGAAAAGGCAGAGACTCATTATCCATTGTTACATTAAGTCTAGTAACATAATGCTTTTCGATGATGATGTTGCAAAGATTGCTGATTTTGATTTGTCAAATCAAGCCCCTGATGCAGCAGCACGACTTCATTCTACCCGTGTTCTTGGAACCTTTGGTTATCATGCTCCAGAGTATGCAATGAGTGGGCAGCTTACTTCAATAAGTGATGTTTACTGTTTTGGAGTTATATTGCTGGAACTCTTAACCGGACGTAAACATGTTGCTGTTGCTGGCCATTAA | 282 | 0.3972 | MKRQRLIIHCYIKSSNIMLFDDDVAKIADFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMSGQLTSISDVYCFGVILLELLTGRKHVAVAGH. | 94 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g05987 | 93 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 92 | - | - | |
Seca7g05987 | 93 | PANTHER | PTO-INTERACTING PROTEIN 1-LIKE | 2 | 88 | - | - | |
Seca7g05987 | 93 | ProSiteProfiles | Protein kinase domain profile. | 1 | 93 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g05987 | 93 | Pfam | Protein kinase domain | 5 | 86 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g05987 | 93 | SUPERFAMILY | Protein kinase-like (PK-like) | 6 | 86 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g05987 | Seca-Chr7 | 159839810 | 159840331 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g05987 | 4 | 88 | Receptor kinase-like Gene Family | AT4G02010 | 58.824 | 1.34e-26 | 99.8 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIII | Seca7g05987 | Pkinase | 3e-16 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g05987 | K13436 | - | gmx:547595 | 150.599 |