Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05984 ATGGAAGAGGTTGAGCAAGCCAGCAGAGTAGCTGTTGAAAGCTGTCATAGAGTTCTAAGTTTGTTGTCTCAGCCCCGGGATCAGGTTCAGCATAGGAATTTAATGGTGGAAACTGGGGAAGCTGTGGTGAGGTTCAAGAAAGTTGTTTCCTTGCTTCATAATGGTTTGGGTCATGCAAGATTCAGGAAGTCTAAAAAACTTCAAGTCCCCTTTTCCCAAAGTATCCTCTTAGACAACCCAAATTGCAAAACCAACCATCACTCAAAAAATCTGCAGTTTCCCCAAACCAACTTCCCTGACAATTCAATTCAGGAACTGGGCTCAACCATAAAAAATTCACTGTCTCTGGGAAACCCATCTTTGGAATTAAGCTCCAGTGGGAAAAGTCCTCTTCACCTTACCCAACAAGCTTCATCAACTCACTATCACTTCTTACAGCAGCAGCAGCAGCAACAGTCTAGATTGTTGCTGCAGCAGCAGCAGCAGCAACAAATGAAGCATCAAGCAGAAATGATGTTCCGAAGGAACAATAGTAGTGGCATAAACCTGAATTTTGACAGCACTAGCTGCACACCAACAATTTCATCTACTAGGTCTTTCATGTCTTCCTTGAGCATAGATGGAAGCGTAGCTAACTTAGATGGAAGTGCCTTCCATTTAATAGGAGCTCCACACTCTTCTGATCAGAATTCACAACAGCATAAGAGAAAATGTTCTGCCAAAGGTGATGAGGGCAGCTTGAAATGTGGGAGCAGTGCTAGATGCCATTGCTCAAAGAAGAGGAAACATAGAGTGAAGAGATCAATTAAGGTGCCTGCCATCAGCAACAAACTTGCAGATATCCCTCCTGATGATTATTCATGGAGGAAGTACGGGCAGAAGCCAATCAAGGGCTCTCCTCACCCTAGGGGATATTACAAGTGTAGCAGCATGAGAGGCTGTCCTGCTAGGAAGCATGTTGAGAGGTGCTTGGAAGAACCTACCATGCTAATTGTTACTTATGAAGGCGAGCATAACCACCCTAAGTTACCAGCACAATCTGCAAATGCATGA 1053 0.4416 MEEVEQASRVAVESCHRVLSLLSQPRDQVQHRNLMVETGEAVVRFKKVVSLLHNGLGHARFRKSKKLQVPFSQSILLDNPNCKTNHHSKNLQFPQTNFPDNSIQELGSTIKNSLSLGNPSLELSSSGKSPLHLTQQASSTHYHFLQQQQQQQSRLLLQQQQQQQMKHQAEMMFRRNNSSGINLNFDSTSCTPTISSTRSFMSSLSIDGSVANLDGSAFHLIGAPHSSDQNSQQHKRKCSAKGDEGSLKCGSSARCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPTMLIVTYEGEHNHPKLPAQSANA. 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05984 350 SMART WRKY_cls 282 342 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g05984 350 Pfam Plant zinc cluster domain 235 280 IPR018872 -
Seca7g05984 350 ProSiteProfiles WRKY domain profile. 277 343 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g05984 350 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 348 IPR044810 GO:0003700
Seca7g05984 350 FunFam WRKY transcription factor 65 266 343 - -
Seca7g05984 350 SUPERFAMILY WRKY DNA-binding domain 280 342 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca7g05984 350 Gene3D WRKY domain 268 344 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca7g05984 350 MobiDBLite consensus disorder prediction 223 244 - -
Seca7g05984 350 Pfam WRKY DNA -binding domain 284 341 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05984 Seca-Chr7 159794417 159797529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05984 1 347 WRKY Transcription Factor Family AT2G30590 57.702 3.64e-129 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca7g05984 WRKY 4.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05984 - - gmx:100170681 622.083