Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05954 ATGAATTCTAGAAGAGACAACCGTAATAACAGAGTTGCTCTGTTTGATGGTATTGAGGAGGGTGGCATCAGAGCATCTTCTCTTTACTCAACTTCTTCCCATGAAATAAGTGAACATGATAATGATGAAGCAATGGATGGATTACAAGATAGAGTCAATCTGCTGAAAAGATTGTCAGGTGATATACATGAGGAGGTGGATAGTCATAACCGCATGCTGGATAGAATGGGCAATGATATGGATTCTTCAAGAGGAACCCTCTCAGGCACTATGGACAAATTCAAAATGGTATTTGAGACAAAATCCAGCCGAAGAATGTTTTCACTTGTAGCATCCTTTGTTGTGATTTTTCTTATAATATACTATCTGACTAGGTAA 378 0.381 MNSRRDNRNNRVALFDGIEEGGIRASSLYSTSSHEISEHDNDEAMDGLQDRVNLLKRLSGDIHEEVDSHNRMLDRMGNDMDSSRGTLSGTMDKFKMVFETKSSRRMFSLVASFVVIFLIIYYLTR. 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05954 125 Gene3D - 42 106 - -
Seca7g05954 125 PANTHER GOLGI SNARE BET1-RELATED 8 124 - -
Seca7g05954 125 CDD SNARE_Bet1 38 95 IPR039899 -
Seca7g05954 125 FunFam bet1-like SNARE 1-1 42 106 - -
Seca7g05954 125 SUPERFAMILY SNARE fusion complex 28 97 - -
Seca7g05954 125 SMART tSNARE_6 30 97 IPR000727 -
Seca7g05954 125 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 35 97 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05954 Seca-Chr7 159453951 159457258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05954 41 124 SNARE and Associated Proteins AT1G28490 25.000 9.39e-07 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05954 K08504 - gmx:100500329 229.18