Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05944 ATGGGTACCAACTTGCACCAACTACTCAAAAGCCTCTGTTTGGGTACTGATTGGAAGTATGCTATCTTTTGGAAGCTACAACATCGTGCTCGGATGGTCTTGACATGGGAGGATGCTTACTATGACAATCCTGATAATTACGACACTTCCGAAAATAAGTACTGCCAGAAGTCCTTGGAGCAGATTGGCAGTGGGGATTTTTCACATGACCCTCTAGGGCTAGTTGTGGCAATGATGTCGTATCATGTATATTCGTTAGGGGAAGGTATTGTTGGACAGGTAGCTGTTACAGGAAAGCATCAGTGGATCTGTGTAGATAATCAAGTTATAAATTCTAGCCCATCTTTTAAGTCTGCTGATGCGTGGCAATCTCAGTTTTCTGCTGGAATTAGGACCATTGTTGTGGTAGCGGTAGTCCCACTTGGAGTTGTTCAGATTGGTTCGTTAAATAAGGTTATTGAAGATATGAGTGTTGTAACTCATATCAGAAGTCTCTTTTTGTCTACTCAAGATTACACTGTAGGCTATCTTCCTAGTCAAATACAAAGTAGTGTGAAGAATTCTTCATCTCTGCTGGATGTATCCACAAAAGCGTTGTCTTCAGAAATTATGCCTGCTCACTTACATATAGAGAAAACCATGAAAAGTGAAACAATGGATATTTTAATGCCCTTCCAATGTCATGGGAAGAACTGTCCACCTCATACCGTTTATCATGAAATGGCTGTTGATGTGGCCAAGCATGAGGGGCCTGAATTTAACAGTGCTGAAAGTTCCATTTTGCTTCAGTCAATTTCAAATATGATGAATGCAGAGCATCAGAAATTTGTAGGGATGAGGCCTGTAGATGAGAGGAAGTGTGAAGGGAACAATAATGGGTGCAAAGATACAAGTTTGAAATCAGAAAAAAATGTCTCATCATTTTTACACAATTTGGTCGTGGATAATAATAGCATGAGTCCATTAGAAAAAGTCGGAGTTGATCCTGCATGCTTCCCTTCAGACTTTCTTGATGCAGTTGCTTGTGAGAGTGATAAGTTACATTATGTAGATATCAATCAACAAGGGATGTTGAATGTGCCTAGACCTTCAGATGCAAACTCCCAAAAAGATACTGAGAAGTCAAAGTTTCAGACTGAGCCTTGTTATGAGGATACCTCATATACATTGAAGTTCCCTGCTGGCTATGAGCTACATGAAGCACTTGGACCAGGTTTCCTGAACGGGAGTAGATATTTTGATTGGGAGGCACAAACAAATCAAGATGTTAAAACTGCTGAGATGTCAGATGAGATTAGCTGTAGCCAATTGACTTCTGAATCTCGTCCAGAGCATCTTTTGGAAGCAATGGTCACTAATGTTTTCCATAGTAATAATTGTGTTAATAGTGAGTCATCATTTTCTACATCAATGCAGGCTGCAATGACCTCCGCAAGAAATCCTGAAACTTCCATTCATACTATGCACACTATTAATTCAGAAGGATATTCAATAGATCGACCCTCCAATGTTAGAGTGGACAAACAACAAAGTTTGAGTTCATCAGGGATATGTGGTGTGATGTCCCCAAAAGCTCTTTCTTCTACATGTCCTAGTTCTTCATGTTCCAAACAGTTTGAGAGGTATTCTGAACCAGGTAAAAACAGTAAGAAGAGGGCTAGGCCTGGGGAAAGTTGTAGGCCTAGGCCAAGGGACAGACAACTGATCCAAGACCGTATAAAGGAGTTACGAGAACTGGTGCCAAATGGAGCAAAGTGCAGTATTGATTCACTGCTGGAGTGCACAATAAAGCACATGCTCTTTCTCCAAAGCATAACTAAGCATGCCGACAAGCTAAATAAATATGCTGATTCAAAGACAAAGTTGCATCATATGGAAAAAGACATTCTAGGATCATCTGGTTATCAACAGGGTTCAAGTTGGGCAATGGAGGTAGGAGGCCATCTGAAAGTTCATTCAGTATTAGTGGAGAATCTTAGTAAGAATGGGCAGATGCTTGTTGAGATGCTGTGTGACGAGTGCAGCCATTTTCTTGAGATAGCAGAAGCCATAAGAAGCTTAGGCCTGACAATTTTGAATGGTGCAACAGAAGCTCATGGTGAGAAGACATGTATATGTTTCGTGGTTGAGGTAGGATCAAAAGGCCAAAACAACAGAAATTTACACAGATTGGATATCCTGTGGCCGCTTGTTCAATTACTGCAATCCAAGAGCACAACGTATTCATGA 2229 0.4074 MGTNLHQLLKSLCLGTDWKYAIFWKLQHRARMVLTWEDAYYDNPDNYDTSENKYCQKSLEQIGSGDFSHDPLGLVVAMMSYHVYSLGEGIVGQVAVTGKHQWICVDNQVINSSPSFKSADAWQSQFSAGIRTIVVVAVVPLGVVQIGSLNKVIEDMSVVTHIRSLFLSTQDYTVGYLPSQIQSSVKNSSSLLDVSTKALSSEIMPAHLHIEKTMKSETMDILMPFQCHGKNCPPHTVYHEMAVDVAKHEGPEFNSAESSILLQSISNMMNAEHQKFVGMRPVDERKCEGNNNGCKDTSLKSEKNVSSFLHNLVVDNNSMSPLEKVGVDPACFPSDFLDAVACESDKLHYVDINQQGMLNVPRPSDANSQKDTEKSKFQTEPCYEDTSYTLKFPAGYELHEALGPGFLNGSRYFDWEAQTNQDVKTAEMSDEISCSQLTSESRPEHLLEAMVTNVFHSNNCVNSESSFSTSMQAAMTSARNPETSIHTMHTINSEGYSIDRPSNVRVDKQQSLSSSGICGVMSPKALSSTCPSSSCSKQFERYSEPGKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLECTIKHMLFLQSITKHADKLNKYADSKTKLHHMEKDILGSSGYQQGSSWAMEVGGHLKVHSVLVENLSKNGQMLVEMLCDECSHFLEIAEAIRSLGLTILNGATEAHGEKTCICFVVEVGSKGQNNRNLHRLDILWPLVQLLQSKSTTYS. 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05944 742 MobiDBLite consensus disorder prediction 543 565 - -
Seca7g05944 742 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 740 IPR043561 GO:0003700|GO:0006355
Seca7g05944 742 MobiDBLite consensus disorder prediction 526 542 - -
Seca7g05944 742 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
Seca7g05944 742 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 553 602 IPR011598 GO:0046983
Seca7g05944 742 MobiDBLite consensus disorder prediction 358 377 - -
Seca7g05944 742 MobiDBLite consensus disorder prediction 526 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05944 Seca-Chr7 159316080 159322195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05944 1 738 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 41.915 1.72e-160 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05944 - - gmx:100777740 1112.06