Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05941 ATGACTAACAATGATGGTGCATTCAGGGTGGTATGTAGGAAATTTAGGCCTCACCTTTTCATGGTTCTGGTTCAGATGGCTCTTGCACTTCTCTATTTCCTAGTAGAGGCTTCATTTAATAATGGGATGAACCCTCATGTTTTTGTTACTTATCGGTATGCTGTTGGGGGCTTGGTAGCACTTCCTTTTGCTTATGTTTTTGAAAGAGAAACAAGGCCAAAGTTGACAATGCCACTGTTCATGGAGCTATTTTTGGTTTCCCTCTTCGGAATCAGTCTTACCCTGAACGTGTTTTTTGCAAGTTTGAAATATACCACTCCTTCCTTTGTCACATCAATGATCAACACAATATCATCTCTTACATTTATATTTGCAGTTGGATTCAGGCTAGAGGCTGTTGATGTTAAGAAGCCTCGTGGGCTAGCTAAAATCTTTGGAACTGTGTTATCTTTGACTGGTGCCCTGATAATGATTTTGTATAAAGGACATACAATACAAAGCTTTCAGGGTGCCCCGTTCCATATCACAGGCAAAATGACTCATAATAACTGGATTAAAGGATCAATTTTGACTGTTACAAGCTGCATATCATGGTCTCTATGGTATATACTGCAGGCAGTTACAGTGAAGAAATATCCAGCACAACTGTCACTAACAGCATGGATAAATTGCATTGGTGCAGCACAGTCTGCTGCCTTTGCTTTACTTATCCAACACAAACCTAGAGCATGGTCCATTACATCCAGTATGGAACTCTGTTGCATTTTATACTCGGGAGTTATATGTGGCAGTTTGATTATCTACCTTCAGATCTGGACCACTGTACAAAAAGGGCCAGTCTTTGTGAGTATGTTTAATCCCCTTGGAACAATTTTGGTGGCAATCCTAGAATATTTTGTTTTTGGACAACGACTCCACATGGGCCTAATTCTGGGAGTTGTGGTTGTTATCATTGGTCTATACTTGCTATTATGGGGAAAAGAAAACCAGTCACAACAATGTTTTCAAAACATGGTGAACTGA 1023 0.3988 MTNNDGAFRVVCRKFRPHLFMVLVQMALALLYFLVEASFNNGMNPHVFVTYRYAVGGLVALPFAYVFERETRPKLTMPLFMELFLVSLFGISLTLNVFFASLKYTTPSFVTSMINTISSLTFIFAVGFRLEAVDVKKPRGLAKIFGTVLSLTGALIMILYKGHTIQSFQGAPFHITGKMTHNNWIKGSILTVTSCISWSLWYILQAVTVKKYPAQLSLTAWINCIGAAQSAAFALLIQHKPRAWSITSSMELCCILYSGVICGSLIIYLQIWTTVQKGPVFVSMFNPLGTILVAILEYFVFGQRLHMGLILGVVVVIIGLYLLLWGKENQSQQCFQNMVN. 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05941 340 PANTHER WAT1-RELATED PROTEIN 18 331 IPR030184 GO:0016020|GO:0022857
Seca7g05941 340 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020
Seca7g05941 340 Pfam EamA-like transporter family 19 158 IPR000620 GO:0016020
Seca7g05941 340 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 327 - -
Seca7g05941 340 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05941 Seca-Chr7 159291458 159294070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05941 9 330 Nodulin-like Gene Family AT2G37460 38.154 2.63e-77 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05941 - - gmx:100808275 520.776