LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca7g05908	ATGCAGTGTGACTTTTCCATGTCCATGATGGCACGTTCGAAGTTCTACAAGAAGCCATCTTTGTTTATGATCGAATATAATCCTGATATGGCTCTCTGTTTTTTACCTGAGATTTTTTCAACGGTCTTTAAAGAAGATGTTCCGAGGAGAGTTGTATTTCGTGATCCTTATCAAAATTTAATTCATCTGGTCGTTCAGAGGGATGGGGATGATCTTCTATTCACTCATGGTTGGACAATGTTGAAAGATATATATGATGATCTTAGTGATGGGGGATGGTTGAAGTTTAACTATGTTGGTGGAAATGAGTTTGACATTAAAGTGATGCACAGGTGGTTAGGTGAAGTAAATTACCCAGTTCCTGGGAAGGAATATAAGCATGAAAGAGAATATCTTCCTGAGGAAGTTATCCCTGGGTACAAGGTACAACATGCAGATGATTTTCACTACGTAGACAAGAAGATGACGGATTACCTTTGTTCCAATCATTTGCTGAATCTGTCGTCTGCCCTTTGTAAACGATTTAGAGGAAGACCAACCAATTGTTGTTTGAAGGATGTAGATGGAGTTGTTACACCTATTACTTTGAAGTGGGGAAAGAAAGGACATATTGCATACATTACAAGAGGATGGAGGCAGTTTTGTTCTGCAGGAAATTTGAAAAAAGATTCAATTGTCAGATTTAGGGTTGATCCTGACGATTCTAATACAATTTATGTTAGGATTATTGAAGATATTCCAACAATTTAG	750	0.3747	MQCDFSMSMMARSKFYKKPSLFMIEYNPDMALCFLPEIFSTVFKEDVPRRVVFRDPYQNLIHLVVQRDGDDLLFTHGWTMLKDIYDDLSDGGWLKFNYVGGNEFDIKVMHRWLGEVNYPVPGKEYKHEREYLPEEVIPGYKVQHADDFHYVDKKMTDYLCSNHLLNLSSALCKRFRGRPTNCCLKDVDGVVTPITLKWGKKGHIAYITRGWRQFCSAGNLKKDSIVRFRVDPDDSNTIYVRIIEDIPTI.	250

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca7g05908	249	Pfam	B3 DNA binding domain	154	244	IPR003340	GO:0003677
	Seca7g05908	249	SUPERFAMILY	DNA-binding pseudobarrel domain	146	242	IPR015300	-
	Seca7g05908	249	Gene3D	-	142	245	IPR015300	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca7g05908	Seca-Chr7	158875103	158876204	Dispersed/Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	B3	Seca7g05908		B3	3.1e-09	CL0405

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca7g05908	-		K05725	ahf:112803777	54.6842