Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05845 ATGAAAATTCTTCAAGATGTAGTCCCTGGTTGTAACAAGGTAATTGGTAAAGCACTTGTCCTGGATGTGATAATAAATTACATCCAATCACTGCAGCGTCAGGTTGAGGTAGACATCATCTTCATCTTTCTATCTCTACTTGAGGCAGTTAATTTGAGATTGACCATGAACCCTACTATTGAATGTTTTCCATCAAAAGATGTAAGTCTATCGACTTTAGTATGTTAA 228 0.3596 MKILQDVVPGCNKVIGKALVLDVIINYIQSLQRQVEVDIIFIFLSLLEAVNLRLTMNPTIECFPSKDVSLSTLVC. 76
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05845 75 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 31 IPR011598 GO:0046983
Seca7g05845 75 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 2 37 IPR036638 GO:0046983
Seca7g05845 75 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 67 IPR024097 GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca7g05845 Seca-Chr7 158115756 158116156 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05845 1 74 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 69.333 1.20e-25 94.7
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05845 - - ahf:112748872 104.76