Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05830 ATGATTCAGGTTCTCAACAAAATTGGATTGGATTGCCCTGACCTTGAGACTATTTGCATCAAAGATCAAACCCTAACTACTGACAGTGTTGAGAAGATTATTGGCTGGGCTGTAAGTTACCATTTTATGCATTCAACTGAAGCTTCTACCAAAGAATCTAAGCTTGTGATATCTGCAGAAAGCATTAAGTATGGGTTTAACATTCTACAGGGCATTCAAAATGAGAACAAGAACTTGAAAAAATCACTAAAGGATGTGGTTACTGAGAATGAATTTGAGAAAAAACTGCTCGCAAATGTTATTCCACCAATTGATATTGGAGTCAAATTTGATGATATTGGAGCGTCAGAAAATGTGAAGGACACCTTAAAGGAATTGGTCATGCTTCCTCTTCAGAGGCCTGAATTGTTTGGCAAAGGACAGCTGACTAAGCCTTGCAAGGGAATATTGCTTTTTGGGCCTCCTGGCACAGGAAAAACAATGCTTGCAAAGGCTGTGGCAACTGAAGCTGGAGCAAATTTTATTAACATTTTGATGTCCAACATTACTTCAAAGGTATTAATATTGCAAATAGAAACTCTCTTGTTCTATGTTGTCTATTTCCTTTTATGCTTTTAA 618 0.3722 MIQVLNKIGLDCPDLETICIKDQTLTTDSVEKIIGWAVSYHFMHSTEASTKESKLVISAESIKYGFNILQGIQNENKNLKKSLKDVVTENEFEKKLLANVIPPIDIGVKFDDIGASENVKDTLKELVMLPLQRPELFGKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINILMSNITSKVLILQIETLLFYVVYFLLCF. 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05830 205 Coils Coil 69 89 - -
Seca7g05830 205 Gene3D - 107 185 IPR027417 -
Seca7g05830 205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 177 IPR027417 -
Seca7g05830 205 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 7 185 - -
Seca7g05830 205 Pfam ATPase family associated with various cellular activities (AAA) 149 186 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05830 Seca-Chr7 157942421 157943456 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05830 144 187 Calmodulin-binding Proteins AT3G56690 47.727 2.02e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05830 - - gmx:100801477 328.176