Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05781 ATGATTCAGGTTCTCAACAAAATTGGATTGGATTGCCCTGACCTTGAGACTATTTGCATCAAAGATCAAACCCTAACTACTGACAGTGTTGAGAAGATTATTGGCTGGGCTGTAAGTTACCATTTTATGCATTCAACTGAAGCTTCTACCAAAGAATCTAAGCTTGTGATATCTGCAGAAAGCATTAAGTATGGGTTTAACATTCTACAGGGCATTCAAAATGAGAACAAGAACTTGAAAAAATCACTAAAGGATGTGGTTACTGAGAATGAATTTGAGAAAAAACTGCTCGCAAATGTTATTCCACCAATTGATATTGGAGTCAAATTTGATGATATTGGAGCGTCAGAAAATGTGAAGGACACCTTAAAGGAATTGGTCATGCTTCCTCTTCAGAGGCCTGAATTGTTTGGCAAAGGACAGCTGACTACGCCTTGCAAGGGAATATTGCTTTTTGGGCCTCCTGGAACAGGAAAAACAATGCTTGCAAAGGCTGTGGCAACTGAAGCTGGAGCAAATTTTATTAACATTTCGATGTCCAGCATTACTTCAAAGGTATTAATATTGCAAATAGAAACTCTCTTGTTCTATGTTGTCTATTTCCTTTTATGCTTTTAA 618 0.3754 MIQVLNKIGLDCPDLETICIKDQTLTTDSVEKIIGWAVSYHFMHSTEASTKESKLVISAESIKYGFNILQGIQNENKNLKKSLKDVVTENEFEKKLLANVIPPIDIGVKFDDIGASENVKDTLKELVMLPLQRPELFGKGQLTTPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKVLILQIETLLFYVVYFLLCF. 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05781 205 Coils Coil 69 89 - -
Seca7g05781 205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 191 IPR027417 -
Seca7g05781 205 Gene3D - 107 185 IPR027417 -
Seca7g05781 205 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 7 185 - -
Seca7g05781 205 Pfam ATPase family associated with various cellular activities (AAA) 149 186 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05781 Seca-Chr7 157285579 157286615 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05781 145 187 Calmodulin-binding Proteins AT3G56690 48.837 1.34e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05781 - - gmx:100801477 329.331