Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g05757 | ATGGCTACTCGAGGACAAGTCATTACCTGCAAAGCCGCGGTGGCATGGGAACCCAACAAGCCATTAACCATCGAGGACGTTGAGGTGGCTCTGCCACAGGCTGGAGAGGTTCGAGTCCAAATTTTCTACACTGCTCTCTGTCACACCGATGCTTATACTTGGAGCGGCAAGGATCCAGAAGGTCTCTTCCCATGTATACTTGGTCATGAGGCTGCAGGGATTGTGGAAAGTGTTGGAGAAGGTGTTACTGAAGTTCAGCCTGGTGATCATGTCATCCCTTGTTACCAGGCTGAATGTGGAGAGTGCAAGTTTTGCAAATCAGGAAAAACCAATCTCTGTGGCAAAATTCGTGCTGCCACTGGAGTTGGGGTCATGCTGAGCGATCGCAAGAGTCGTTTCTCTATCAATGGAAAGCCAATCTATCATTTTATGGGAACCTCCACATTTAGTCAATATACTGTTGTTCATGATGTTAGTGTAGCTAAGATTGACCCCAAAGCTCCTTTGGAGAAAGTCTGTCTTCTTGGATGCGGTGTTCCAACTGGCCTTGGAGCTGTCTGGAACACTGCAAAGGTGGAAGCAGGGTCAATTGTTGCTGTTTTCGGTCTTGGAACTGTTGGGCTTGCCGTTGCAGAGGGTGCAAAAGCTGCTGGGGCATCACGGATAATTGGCATAGATGTTGATAGCAACAAGTTTGAAAGAGCAAAGAACTTTGGTGTCACTGAGTTTATTAATCCAAGTGAACATGAGAAACCAATTCAGCAGGTAATAGTTGATCTAACAGATGGTGGAGTTGATTATAGTTTTGAGTGCATTGGAAATGTCTCAGTGATGAGGGCTGCTTTGGAATGCTGCCATAAGGTGAGTGCTGCTGCTAGCTCAGGCTGGGGGACATCAGTTATTGTGGGTGTTGCAGCATCAGGGCAGGAAATATCAACTCGACCTTTCCAGTTGGTGACTGGGCGTGTCTGGAAAGGAACAGCTTTTGGTGGCTTCAAGAGCAGCTCACAAGTGCCTTGGCTTGTAGACAAGTACTTGAACAAGGAAATCAAGGTTGATGAGTACATCACTCACAGTTTGACTCTTGCAGAGATCAACAAGGCATTTGACCTCATGCATGAAGGAGGATGTCTCCGTTGTGTGCTTGCAATGCATGTGTGA | 1161 | 0.4703 | MATRGQVITCKAAVAWEPNKPLTIEDVEVALPQAGEVRVQIFYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECGECKFCKSGKTNLCGKIRAATGVGVMLSDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPKAPLEKVCLLGCGVPTGLGAVWNTAKVEAGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDVDSNKFERAKNFGVTEFINPSEHEKPIQQVIVDLTDGGVDYSFECIGNVSVMRAALECCHKVSAAASSGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSSSQVPWLVDKYLNKEIKVDEYITHSLTLAEINKAFDLMHEGGCLRCVLAMHV. | 387 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g05757 | 386 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 68 | 82 | IPR002328 | GO:0008270|GO:0016491 | |
Seca7g05757 | 386 | PANTHER | ALCOHOL DEHYDROGENASE | 5 | 382 | - | - | |
Seca7g05757 | 386 | SUPERFAMILY | GroES-like | 334 | 382 | IPR011032 | - | |
Seca7g05757 | 386 | FunFam | S-(hydroxymethyl)glutathione dehydrogenase | 13 | 201 | - | - | |
Seca7g05757 | 386 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 168 | 347 | IPR036291 | - | |
Seca7g05757 | 386 | Gene3D | - | 13 | 379 | - | - | |
Seca7g05757 | 386 | FunFam | S-(hydroxymethyl)glutathione dehydrogenase | 182 | 327 | - | - | |
Seca7g05757 | 386 | CDD | alcohol_DH_class_III | 8 | 382 | IPR014183 | GO:0006069|GO:0008270|GO:0051903 | |
Seca7g05757 | 386 | Gene3D | - | 182 | 327 | - | - | |
Seca7g05757 | 386 | NCBIfam | S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | 10 | 384 | IPR014183 | GO:0006069|GO:0008270|GO:0051903 | |
Seca7g05757 | 386 | Pfam | Zinc-binding dehydrogenase | 206 | 334 | IPR013149 | - | |
Seca7g05757 | 386 | SUPERFAMILY | GroES-like | 3 | 198 | IPR011032 | - | |
Seca7g05757 | 386 | Pfam | Alcohol dehydrogenase GroES-like domain | 35 | 162 | IPR013154 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g05757 | Seca-Chr7 | 156988965 | 156991825 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g05757 | 10 | 338 | Monolignol Biosynthesis Gene Families | AT1G72680 | 25.970 | 5.42e-14 | 70.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g05757 | K00121 | - | gmx:100793008 | 715.301 |