Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05752 ATGCCAACCTCGCTCATCTTCCTACTCGCTCTCTTTCACTTGCTGCTTTTCAATTCCTCAGCAAAGTTGGTTTCTACGACAGTGTGGTTAGTTAAACCTTCTTCTGGGCCATCTTCTGCTCCTGTGCCATCTCCATCTTACCAAGGTCCTAGTGTGATACCAAGACCAAAACATCCTCATCATGATCATCGTCACCGCAGCATGAAGCCTTATGCCGTGGCTCCGTCCCCTTCTGAAGACCAAGATTGTGGCCAAATGTGTATGGATCCACTCACAGAAACTCCCTTTGGTTCACCTTGTGGTTGTGTAATTCCCATGAAAGTCAGACTTACACTGGATGCAGCTCCTTTGGCTGTTTTTCAAGTAATTAATGAGTTAGAGATTGAAGTTGCATCTGGAACATACTTGAAGCAAAGCCAGGTGAGGATAATGGGTGTCATTCCTGACATTCAAAATCCGGGAAGAGCCATAGTTGATATTAACTTGGTTCCACTTGGAGAGAAGTTTGACAATACTACTGCAGTTCTGACATATGAGAGATTTTGGCACAAGAAAGTTCCTCTAAATAGGAGTCTTTTTGGTGATTACACAGTCTTGTACGCTACTTATCCAGAGTTGGTGCCAGGGATGCCATCGCCTCCACCACATGGAACCTTAGCTGGGAGTGGTCCCGATAACCGTGAAAGTGAAGAAGGTATTATCCCATTCACCGCTGATTTTATCAGCAAGAGTGAGAAGATGAGTCTCAGAACCATAATCATCATTGCTTTGTCTTCCATTTTACTCTTGGTGGTTTTGGTTGGAGCATTGTCCATCGCTTTTAAATGGAGGAAAATTAGGAGACCATCAAGTTCTGTTGGCCCCGGATTCACATCGTCACTAAACAAGAGATCTGGTATAGTTTTAAACTTCATTTTTTATGTGTCTATGTGTGTGTGTTTTGTAAATTATTCTGTAAATTGTATTATAGTTAAGGTAAAATATAAATTGATGAATGCTTATTATGCAGCCATGGAGTCTATGTTGTCAAGCAGATTTACAAGCTCAAGATCAATGTCCCTTGTGTCAACCGTGGCTACTTCTATTCTCTCTGTTAAAACATTTTCCTTTTCTGAGCTTGAGAAGGCAACAGATAAGTTCAGTTCACAAAGGGTATTAGGAGAAGGAGGATTTGGGCGTGTTTATCATGGGACATTAGATGATAGAAGTGATGTTGCAGTTAAGCTGCTAACAAGGGATAATCAGAATGGAGGCCGTGGATTTATCGTGGAAGTTGAGATGCTATGCCGTTTGCATCATCGTAATCTTGTGAAATTAATTGGTATATGCATACAAGGGCGCAGACGTTGCTTAGTGTATGAGCTTGTTCGCAATGGCAGTGTCGAGTCTCATTTGCATGGTGTTGACAAGGAAAGCAGCCCTCTAGATTGGGAAGCGCGTACAAAAATTGCCCTTGGAGCTGCAAGAGGGTTAGCCTATCTTCATGAGGATTCTAATCCTCGTGTAATTCACCGAGACTTCAAAGCTAGCAATATATTGTTAGAAGATGACTTTACCCCCAAGGTTTCTGATTTTGGATTAGCAAGAGAAGCAACTGAAGGAAGTCATTATGTTTCTACAAGGGTCATGGGTACTTTTGGGTATGTTGCCCCAGAATATGCAATGACAGGCCATTTACTGGTTAAAAGTGATGTTTATAGTTATGGCGTTGTGCTACTTGAGCTTCTAACAGGCAGAAAACCGGTGGACATGTCTCAACCTCATGGACAGGAGAATCTTGTAACATGGGCACGGCCACTGTTGACAAGCAGAGAAGGTTTAGAACAGCTGGTGGATGCGTCTTTGGCTGGAAGTTATGACTTTGATGACATGGCAAAAGTTGCTGCTATTGCTTCCATGTGTGTACACCCAGAGGTCACTCAGAGACCTTTTATGGGTGAAGTTGTACAGGCTCTTAAGTTGATATACAATGACAGAGACGAGACCAGTGTGGATTGCTGTAGTTGGAAGGAGTCTTCTGAGTCTGATTTTAGAGATGACATTGCCTTTTATGATAGCAGCAGGTGGAATGTTGAAGGATTAACCCCTCGATTAGCTTATGGGCAACCATCTCCCTTCATCACAATGGAATACAGTTCTGGTCCACTTGAAGGAGTGGAAAAAAGACCCCTTTCGGCTTCAAGCTTGATTGGAGACGAGATGCCAATTAGGGATGGGAATAGATCAGGTCCCTTGAGAACATCTCGGAGCAAGCTATCCTTCTATAGGTTTACTGGAAGTCTGAGTGAACATGGAATACTTCCTTCCAAACGTGTTTGGAATGATGGTAACTGGCCTTAA 2340 0.4282 MPTSLIFLLALFHLLLFNSSAKLVSTTVWLVKPSSGPSSAPVPSPSYQGPSVIPRPKHPHHDHRHRSMKPYAVAPSPSEDQDCGQMCMDPLTETPFGSPCGCVIPMKVRLTLDAAPLAVFQVINELEIEVASGTYLKQSQVRIMGVIPDIQNPGRAIVDINLVPLGEKFDNTTAVLTYERFWHKKVPLNRSLFGDYTVLYATYPELVPGMPSPPPHGTLAGSGPDNRESEEGIIPFTADFISKSEKMSLRTIIIIALSSILLLVVLVGALSIAFKWRKIRRPSSSVGPGFTSSLNKRSGIVLNFIFYVSMCVCFVNYSVNCIIVKVKYKLMNAYYAAMESMLSSRFTSSRSMSLVSTVATSILSVKTFSFSELEKATDKFSSQRVLGEGGFGRVYHGTLDDRSDVAVKLLTRDNQNGGRGFIVEVEMLCRLHHRNLVKLIGICIQGRRRCLVYELVRNGSVESHLHGVDKESSPLDWEARTKIALGAARGLAYLHEDSNPRVIHRDFKASNILLEDDFTPKVSDFGLAREATEGSHYVSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPHGQENLVTWARPLLTSREGLEQLVDASLAGSYDFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDRDETSVDCCSWKESSESDFRDDIAFYDSSRWNVEGLTPRLAYGQPSPFITMEYSSGPLEGVEKRPLSASSLIGDEMPIRDGNRSGPLRTSRSKLSFYRFTGSLSEHGILPSKRVWNDGNWP. 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05752 779 FunFam Receptor-like serine/threonine-protein kinase ALE2 456 671 - -
Seca7g05752 779 Gene3D Phosphorylase Kinase; domain 1 352 455 - -
Seca7g05752 779 FunFam receptor-like serine/threonine-protein kinase ALE2 353 455 - -
Seca7g05752 779 ProSiteProfiles Protein kinase domain profile. 380 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g05752 779 PANTHER OS01G0750732 PROTEIN 76 673 - -
Seca7g05752 779 MobiDBLite consensus disorder prediction 35 76 - -
Seca7g05752 779 ProSitePatterns Protein kinases ATP-binding region signature. 386 408 IPR017441 GO:0005524
Seca7g05752 779 MobiDBLite consensus disorder prediction 38 52 - -
Seca7g05752 779 SUPERFAMILY Protein kinase-like (PK-like) 360 655 IPR011009 -
Seca7g05752 779 Gene3D Transferase(Phosphotransferase) domain 1 456 674 - -
Seca7g05752 779 CDD STKc_IRAK 386 655 - -
Seca7g05752 779 Pfam Protein tyrosine and serine/threonine kinase 382 652 IPR001245 GO:0004672|GO:0006468
Seca7g05752 779 ProSitePatterns Serine/Threonine protein kinases active-site signature. 502 514 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05752 Seca-Chr7 156898805 156905988 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05752 80 765 Receptor kinase-like Gene Family AT5G56890 50.644 0.0 618
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Seca7g05752 PK_Tyr_Ser-Thr 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05752 - - lja:Lj0g3v0221179.1 1063.14