Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05751 ATGTATGACATATTAGGTTCTTTTCCTGCAGCAAAGTTGGTTTCTACGACAGTGTGGTTAGTTAAACCTTCTTCTGGGCCATCTTCTGCTCCTGTGCCATCTCCATCTTACCAAGGTCCTAGTGTGATACCAAGACCAAAACATCCTCATCATGATCATCGTCACCGCAGCATGAAGCCTTATGCCGTGGCTCCGTCCCCTTCTGAAGACCAAGATTGTGGCCAAATGTGTATGGATCCACTCACAGAAACTCCCTTTGGTTCACCTTGTGGTTGTGTAATTCCCATGAAAGTCAGACTTACACTGGATGCAGCTCCTTTGGCTGTTTTTCAAGTAATTAATGAGTTAGAGATTGAAGTTGCATCTGGAACATACTTGAAGCAAAGCCAGGTGAGGATAATGGGTGTCATTCCTGACATTCAAAATCCGGGAAGAGCCATAGTTGATATTAACTTGGTTCCACTTGGAGAGAAGTTTGACAATACTACTGCAGTTCTGACATATGAGAGATTTTGGCACAAGAAAGTTCCTCTAAATAGGAGTCTTTTTGGTGATTACACAGTCTTGTACGCTACTTATCCAGAGTTGGTGCCAGGGATGCCATCGCCTCCACCACATGGAACCTTAGCTGGGAGTGGTCCCGATAACCGTGAAAGTGAAGAAGGTATTATCCCATTCACCGCTGATTTTATCAGCAAGAGTGAGAAGATGAGTCTCAGAACCATAATCATCATTGCTTTGTCTTCCATTTTACTCTTGGTGGTTTTGGTTGGAGCATTGTCCATCGCTTTTAAATGGAGGAAAATTAGGAGACCATCAAGTTCTGTTGGCCCCGGATTCACATCGTCACTAAACAAGAGATCTGGTATAGTTTTAAACTTCATTTTTTATGTGTCTATGTGTGTGTGTTTTGTAAATTATTCTGTAAATTGTATTATAGTTAAGGTAAAATATAAATTGATGAATGCTTATTATGCAGCCATGGAGTCTATGTTGTCAAGCAGATTTACAAGCTCAAGATCAATGTCCCTTGTGTCAACCGTGGCTACTTCTATTCTCTCTGTTAAAACATTTTCCTTTTCTGAGCTTGAGAAGGCAACAGATAAGTTCAGTTCACAAAGGGTATTAGGAGAAGGAGGATTTGGGCGTGTTTATCATGGGACATTAGATGATAGAAGTGATGTTGCAGTTAAGCTGCTAACAAGGGATAATCAGAATGGAGGCCGTGGATTTATCGTGGAAGTTGAGATGCTATGCCGTTTGCATCATCGTAATCTTGTGAAATTAATTGGTATATGCATACAAGGGCGCAGACGTTGCTTAGTGTATGAGCTTGTTCGCAATGGCAGTGTCGAGTCTCATTTGCATGGTGTTGACAAGGAAAGCAGCCCTCTAGATTGGGAAGCGCGTACAAAAATTGCCCTTGGAGCTGCAAGAGGGTTAGCCTATCTTCATGAGGATTCTAATCCTCGTGTAATTCACCGAGACTTCAAAGCTAGCAATATATTGTTAGAAGATGACTTTACCCCCAAGGTTTCTGATTTTGGATTAGCAAGAGAAGCAACTGAAGGAAGTCATTATGTTTCTACAAGGGTCATGGGTACTTTTGGGTATGTTGCCCCAGAATATGCAATGACAGGCCATTTACTGGTTAAAAGTGATGTTTATAGTTATGGCGTTGTGCTACTTGAGCTTCTAACAGGCAGAAAACCGGTGGACATGTCTCAACCTCATGGACAGGAGAATCTTGTAACATGGGCACGGCCACTGTTGACAAGCAGAGAAGGTTTAGAACAGCTGGTGGATGCGTCTTTGGCTGGAAGTTATGACTTTGATGACATGGCAAAAGTTGCTGCTATTGCTTCCATGTGTGTACACCCAGAGGTCACTCAGAGACCTTTTATGGGTGAAGTTGTACAGGCTCTTAAGTTGATATACAATGACAGAGACGAGACCAGTGTGGATTGCTGTAGTTGGAAGGAGTCTTCTGAGTCTGATTTTAGAGATGACATTGCCTTTTATGATAGCAGCAGGTGGAATGTTGAAGGATTAACCCCTCGATTAGCTTATGGGCAACCATCTCCCTTCATCACAATGGAATACAGTTCTGGTCCACTTGAAGGAGTGGAAAAAAGACCCCTTTCGGCTTCAAGCTTGATTGGAGACGAGATGCCAATTAGGGATGGGAATAGATCAGGTCCCTTGAGAACATCTCGGAGCAAGCTATCCTTCTATAGGTTTACTGGAAGTCTGAGTGAACATGGAATACTTCCTTCCAAACGTGTTTGGAATGATGGTAACTGGCCTTAA 2310 0.426 MYDILGSFPAAKLVSTTVWLVKPSSGPSSAPVPSPSYQGPSVIPRPKHPHHDHRHRSMKPYAVAPSPSEDQDCGQMCMDPLTETPFGSPCGCVIPMKVRLTLDAAPLAVFQVINELEIEVASGTYLKQSQVRIMGVIPDIQNPGRAIVDINLVPLGEKFDNTTAVLTYERFWHKKVPLNRSLFGDYTVLYATYPELVPGMPSPPPHGTLAGSGPDNRESEEGIIPFTADFISKSEKMSLRTIIIIALSSILLLVVLVGALSIAFKWRKIRRPSSSVGPGFTSSLNKRSGIVLNFIFYVSMCVCFVNYSVNCIIVKVKYKLMNAYYAAMESMLSSRFTSSRSMSLVSTVATSILSVKTFSFSELEKATDKFSSQRVLGEGGFGRVYHGTLDDRSDVAVKLLTRDNQNGGRGFIVEVEMLCRLHHRNLVKLIGICIQGRRRCLVYELVRNGSVESHLHGVDKESSPLDWEARTKIALGAARGLAYLHEDSNPRVIHRDFKASNILLEDDFTPKVSDFGLAREATEGSHYVSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPHGQENLVTWARPLLTSREGLEQLVDASLAGSYDFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDRDETSVDCCSWKESSESDFRDDIAFYDSSRWNVEGLTPRLAYGQPSPFITMEYSSGPLEGVEKRPLSASSLIGDEMPIRDGNRSGPLRTSRSKLSFYRFTGSLSEHGILPSKRVWNDGNWP. 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05751 769 ProSiteProfiles Protein kinase domain profile. 370 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g05751 769 PANTHER OS01G0750732 PROTEIN 66 663 - -
Seca7g05751 769 FunFam receptor-like serine/threonine-protein kinase ALE2 343 445 - -
Seca7g05751 769 CDD STKc_IRAK 376 645 - -
Seca7g05751 769 ProSitePatterns Serine/Threonine protein kinases active-site signature. 492 504 IPR008271 GO:0004672|GO:0006468
Seca7g05751 769 Pfam Protein tyrosine and serine/threonine kinase 372 642 IPR001245 GO:0004672|GO:0006468
Seca7g05751 769 FunFam Receptor-like serine/threonine-protein kinase ALE2 446 661 - -
Seca7g05751 769 MobiDBLite consensus disorder prediction 24 66 - -
Seca7g05751 769 Gene3D Transferase(Phosphotransferase) domain 1 446 664 - -
Seca7g05751 769 MobiDBLite consensus disorder prediction 28 42 - -
Seca7g05751 769 SUPERFAMILY Protein kinase-like (PK-like) 350 645 IPR011009 -
Seca7g05751 769 ProSitePatterns Protein kinases ATP-binding region signature. 376 398 IPR017441 GO:0005524
Seca7g05751 769 Gene3D Phosphorylase Kinase; domain 1 342 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05751 Seca-Chr7 156884828 156890002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05751 70 755 Receptor kinase-like Gene Family AT5G56890 50.644 0.0 618
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Seca7g05751 PK_Tyr_Ser-Thr 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05751 - - lja:Lj0g3v0221179.1 1053.12