Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05745 ATGGGAGAGGTGAAGTTACTGGGATCTTGGGCTAGTGGATACGTTTACAGGATCAAATGGGCTTTAAAACTGAAGGGTGTGACATATGAGTTTGTGGAGGAGGATTTAGCTCACAAGAGTGATTTGCTATTGCAGTATAACCCGGTTTACAAAAAGGTTCCAGTCCTTGTTCACAATGGAAAGCCAATCTCAGAATCCACGGTTATCCTTGAATACATAGAGGAAACATGGCCACAGACACCCTTGCTTCCGAAAGACCCATATGAGAGGGCTGTGGTACGGTTCTGGGTCAATTTTGCAGAGGAAAAGAGCACTTCGATTAAGTCATTCTTTGTGTGTGTTGGAGAAGAGCTTCAGAAGGCAACAGAGGAAGTTAGAGAAGTGTTCAAAATATTAGAAGAAACCATAGGAGACAAGAAATATTTTGGTGGTGATGAAATTGGACTTTTAGACATAAATTTGGGATGGATAGCCTTGTTATTTGGAGTTGGAGTCCTTGAAGAAGTTGTTGGTGTTAAAGTGTTGGTTGTCAATGATTTCCCTCGCTTGTTTACTTGGGTTCAGAACTTCAGGGAGCACCCTGCTATCAAAGCTAACCTTCCAAGTCACCAAGAGTTCTTTGCTTATTACAAGAAAAGGAGGGAGATTATTGTTGCATCCAAAACGGAATAA 672 0.4152 MGEVKLLGSWASGYVYRIKWALKLKGVTYEFVEEDLAHKSDLLLQYNPVYKKVPVLVHNGKPISESTVILEYIEETWPQTPLLPKDPYERAVVRFWVNFAEEKSTSIKSFFVCVGEELQKATEEVREVFKILEETIGDKKYFGGDEIGLLDINLGWIALLFGVGVLEEVVGVKVLVVNDFPRLFTWVQNFREHPAIKANLPSHQEFFAYYKKRREIIVASKTE. 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05745 223 CDD GST_C_Tau 87 213 IPR045074 GO:0004364|GO:0006749
Seca7g05745 223 SUPERFAMILY Thioredoxin-like 4 102 IPR036249 -
Seca7g05745 223 CDD GST_N_Tau 4 77 - -
Seca7g05745 223 Gene3D Glutaredoxin 1 85 - -
Seca7g05745 223 Pfam Glutathione S-transferase, C-terminal domain 116 194 IPR004046 -
Seca7g05745 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 205 IPR045073 -
Seca7g05745 223 Pfam Glutathione S-transferase, N-terminal domain 4 74 IPR004045 -
Seca7g05745 223 Gene3D - 86 221 - -
Seca7g05745 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Seca7g05745 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 210 IPR010987 -
Seca7g05745 223 FunFam Tau class glutathione S-transferase 1 85 - -
Seca7g05745 223 SFLD Glutathione Transferase (cytosolic) 1 220 IPR040079 -
Seca7g05745 223 FunFam Tau class glutathione S-transferase 83 220 - -
Seca7g05745 223 SUPERFAMILY GST C-terminal domain-like 75 217 IPR036282 -
Seca7g05745 223 SFLD Main.3: Omega- and Tau-like 1 220 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05745 Seca-Chr7 156736546 156737985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05745 3 215 Glutathione S-transferase Gene Family AT2G29420 47.907 6.38e-63 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05745 K00799 - gmx:100500361 325.479