Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05678 ATGAGTGGAGCGAAGGGGAAGAAGAAGGGAGTGAGCTTCGTGATCGATTGCGCGAAGCCAGTGGAGGATAAGATTATGGACATTGCTTCTCTTGAGAAGTTCCTTCAGGAGAGGATCAAAGTCGGCGGCAAGGCCGGTGCCCTCGGTGATTCCATTACCGTTACTCGGGAAAAGACCAAGATCACCGTCACCTCCGACAGCAACTTCTCCAAACGGTATCTGAAATACTTAACCAAGAAGTACCTGAAAAAGCACAATGTGAGGGATTGGCTTCGGGTGATTGCCTCCAACAAGGACCGGAATGTCTATGAGTTGAGATACTTCAACATTGCTGAGAATGAGGGTGAAGAGGAAGACTAA 360 0.4861 MSGAKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSITVTREKTKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED. 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05678 119 FunFam 60S ribosomal protein L22-2 1 119 - -
Seca7g05678 119 Pfam Ribosomal L22e protein family 9 117 IPR002671 GO:0003735|GO:0005840|GO:0006412
Seca7g05678 119 Gene3D - 1 119 IPR038526 -
Seca7g05678 119 PANTHER 60S RIBOSOMAL PROTEIN L22 3 119 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05678 Seca-Chr7 156013510 156016401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05678 4 119 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 89.655 2.13e-65 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05678 K02891 - gmx:100500073 220.32