Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05676 ATGGACAAATCCCGCCACACCAAGTCCAACGTTGCAGCTCCCAACCAATCCCAACCAGCTCTTCATCAAGGAAACAAGCAGGCTCATAGACAGCGACAACCTCCAGATTTGTCTCCTGATTCTAGTTCTTGCGGTGGTGGGGTTGCAGACAAAGATTCGTTCTCATTTAAATTTGGGTGGAGATCTTCTAAACAACCTTTTGGAACTCCAATTAAGAAGTTGTTAACTGAAGAGATGTCATCAAACACTGAATCCAAAAGAAGATCACCAGGTGTTATTGCCAGATTGATGGGTCTTGATGGGCTGCCATTTCAGCAGCCTGCGAATAAGCAGCACAAGGGTTTGTCAGAAAACCATCTACAGGGGACAACACAATTAGAGAAAACTCGAAACAGAGGAACAACGAATGATGGCCGGTCCTCTAGAAAAAGCTCCAAGGATCAGCAAGAATTTAAGGATGTATTTGAGGTCTCTGAGATCCCAAAGGTAGAGAGTAATAGGTATTCATCGCATGGGTGTGCAGACTTGAAGATCACTGATGCTGAGATTTCATTCATTGAACAGAAGTTCATGGATGCCAAACGCCTTGCAACTTATCAGGATTTACAGTCTTCAAAGGATTTCCGTGATACCCTTGAGGTTTTGGACTCTAACAAGGATCTTCTCCTAAAATACTTTAAGCGACCAGATTCTTTGTTTAAAAAGCATTTGAGTGATCTGCAAGCTTCTCCTCTCCAATCACATTTTGGTAATGTAGAAGCTGCAAATATTGAGAAGTATGAACATGACTACAGTTGGAGGTCTGATAGGGAGACAACAAGGTCGAATTACAATAGATTTCCTCAGAAACAACAAGATGGTTATCCTTGCCAATTCGACAAAAGACATGTGATGCACAGTTCACCAAAATCATCAAAGCTTCACTTTAAGGGTAGCCATGAACAAGATGCAGTCCCCACAAAGATTGTTGTCCTAAAACCTAATCTCGGAAAATTGCAGAATGGTACGAGGATTGCATCATCACCTTGTTCTTCGCATAATTTTCTGTCAGAGCATGGAAATCACACTGAACTTTCGAATGCCAGATTTAGAGACACTGAACTGTATCAAATGACAAATTTGCCTGACAGTGCCAGGTCTTTTAGGCACAATTCTTTGGAATCTAGAGAAATTGCAAAGGAAATCACTAGGCAAATGAAAAATAGTCTGAGCAATGGTTGCGCAATGTTTTCGTCTTCTAGATTTAGAGGATATACTGGGGATGGTAGTTCATATAGTGTTTCTGGGAATCATTCTCCAGAGGAAACATCAAATTTGGGAATTTCATTGGACTTAAATAACCGTAGCAGGCGGTCATCCCATTCTAGTGAGTCATCTGTGAGTAGAGAGGCAAAAAAGAGATTATCAGAGAGGTGGAAAATGGCACACAAGTCTCAAGAGGTGCAAGTCATCAGCAGGAGCAGCACGCTGGCTGAAATGCTTGCCATCCCTGATAACGAAATGAAGGCTGCAAATTTTGACAGCATGGTTAGTAGGGAAGGTTTAGATGATAAATTTGCTCGCAATGGTGAACCTTCTGGGTGGGCAGAACCATTGGGGATCAGCAGTAGAGATGGTTGGAAGGATGGATATATTGGAAGTTTGCCTAGGTCAAAATCTCTTCCCAGTTCATCTACTGTCTTTGGAAGTCCTAGAACATTCTTGCACACTGAAGCACTTCGTGATGATAGATTCATGGTGCGAAAGGAAGCCCTTAAACGGGAGCGGAAAAGAGATATAAAGAATCTTGATCATAGACATGGCGTGAATACTAGAAACATAAAATCTGGTCACAAGAAGTCTCGTTCTTTGCATTCATCGAAGGTGGAAGGTAGTGAGTTTTCTCCAGACTTAAATACAATTCAGAATAAAATGAAGATCAAACTTGAAGATTCACCCAAGCTAGAGGTTCTGGCCACTGAACCCTTTGCCGAGACCCTCAGAGATAAAAGTGCAGTTAATGATGATGTTATGGATGTGGCAAATGAAAACACAGATGGGTCTTCTGAACCATCTTCTGATAACGTGCTTTGTGAATTATCTTCTCGTGTCATGATAAAAGGCGACAGTGGTGTTGTTGACAAAGACAATTCAACACAGCAGGACCTATCGGCTGAGTCTTCTGGTGGAAGTTCAGTCTTCTCTGAACCACCTGTACCTGGGCTTGAATCTTCATGCTGCAAAGATGGTGATCAACCCAGTCCAGTCTCAGTCCTAGAACCTTCATATACTGATGATCTGTCATCTTGTTCTGAATGTTTTGAAAGTCTCAGCGCTGACCTACAAGGGCTGCGAATGCAACTCCAGTTGCTGAAGTTGGGATCTAAAGAAGATGTGGAGGGATCCATGCTAATTTCAAGCGATGAAGATGGTGGGGAAGTATCTACTGGAGTGTTAGAAGAAAATGGATTATGCAGAAATGAAGATAGCTGGGAGTCTTCATACATTATTGATGTCTTGTCTGAGTCTGGCATCAATGGGTCTCGGCTCGATACAGTTATGGAAGCTTGGCATTCTCTAGAATGCCCTGTGAGCCTATCAGTGTTTGATGAACTTGAAAAGAGGTACTGTGATTGGACTACTTGTTCAAGGCCTGAAAGGAGATTGCTTTTTGACCGTATAAATTCAGGAATTGTCAAGATGCACGAGCAATCCCCGTATGCACAACCATGGGTGGCCTCTGCAACAAAAATTTTTGGTTCTATCTTGACCCAGAATGGGCTTCAAGATGATATTTATAGGATGCTAGGGAGCCAAGGAGAAGTAGAGGATGATGCTCTGGGGATGGTCCTGGTTGGGGAGTCGCAGTGGTTGGACTTGAAAGATGACATTGATGTAATAGGCAGAGAAGTCGAGAGATTGTTATTAGATGATTTAGTGGCAGAGATAGCAGGTGCCTAG 2940 0.4255 MDKSRHTKSNVAAPNQSQPALHQGNKQAHRQRQPPDLSPDSSSCGGGVADKDSFSFKFGWRSSKQPFGTPIKKLLTEEMSSNTESKRRSPGVIARLMGLDGLPFQQPANKQHKGLSENHLQGTTQLEKTRNRGTTNDGRSSRKSSKDQQEFKDVFEVSEIPKVESNRYSSHGCADLKITDAEISFIEQKFMDAKRLATYQDLQSSKDFRDTLEVLDSNKDLLLKYFKRPDSLFKKHLSDLQASPLQSHFGNVEAANIEKYEHDYSWRSDRETTRSNYNRFPQKQQDGYPCQFDKRHVMHSSPKSSKLHFKGSHEQDAVPTKIVVLKPNLGKLQNGTRIASSPCSSHNFLSEHGNHTELSNARFRDTELYQMTNLPDSARSFRHNSLESREIAKEITRQMKNSLSNGCAMFSSSRFRGYTGDGSSYSVSGNHSPEETSNLGISLDLNNRSRRSSHSSESSVSREAKKRLSERWKMAHKSQEVQVISRSSTLAEMLAIPDNEMKAANFDSMVSREGLDDKFARNGEPSGWAEPLGISSRDGWKDGYIGSLPRSKSLPSSSTVFGSPRTFLHTEALRDDRFMVRKEALKRERKRDIKNLDHRHGVNTRNIKSGHKKSRSLHSSKVEGSEFSPDLNTIQNKMKIKLEDSPKLEVLATEPFAETLRDKSAVNDDVMDVANENTDGSSEPSSDNVLCELSSRVMIKGDSGVVDKDNSTQQDLSAESSGGSSVFSEPPVPGLESSCCKDGDQPSPVSVLEPSYTDDLSSCSECFESLSADLQGLRMQLQLLKLGSKEDVEGSMLISSDEDGGEVSTGVLEENGLCRNEDSWESSYIIDVLSESGINGSRLDTVMEAWHSLECPVSLSVFDELEKRYCDWTTCSRPERRLLFDRINSGIVKMHEQSPYAQPWVASATKIFGSILTQNGLQDDIYRMLGSQGEVEDDALGMVLVGESQWLDLKDDIDVIGREVERLLLDDLVAEIAGA. 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05676 979 Pfam Domain of unknown function (DUF4378) 826 975 IPR025486 -
Seca7g05676 979 Pfam Protein of unknown function (DUF3741) 187 231 IPR022212 -
Seca7g05676 979 MobiDBLite consensus disorder prediction 603 629 - -
Seca7g05676 979 MobiDBLite consensus disorder prediction 422 454 - -
Seca7g05676 979 MobiDBLite consensus disorder prediction 8 40 - -
Seca7g05676 979 MobiDBLite consensus disorder prediction 706 727 - -
Seca7g05676 979 MobiDBLite consensus disorder prediction 132 151 - -
Seca7g05676 979 MobiDBLite consensus disorder prediction 455 470 - -
Seca7g05676 979 Pfam DUF761-associated sequence motif 84 103 IPR032795 -
Seca7g05676 979 MobiDBLite consensus disorder prediction 1 151 - -
Seca7g05676 979 MobiDBLite consensus disorder prediction 422 470 - -
Seca7g05676 979 PANTHER AFADIN 26 977 - -
Seca7g05676 979 MobiDBLite consensus disorder prediction 702 749 - -
Seca7g05676 979 MobiDBLite consensus disorder prediction 109 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05676 Seca-Chr7 155979825 155985807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05676 66 979 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 39.103 3.65e-148 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05676 - - ccaj:109788117 1366.67