Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05664 ATGGGGAAGGGAAGCCAGAATTGCGAGAAACCAGAAAATTCACATTCAGAGCGAGAAATCTTCAAGGCGTGGTCTAGGAATGTGAGCGAATGCGAGGAGCATTTCAAGGTGAGTCTGAAAACGGGGCTGAGTTCTCACCAAGTGGAGAATCGGCGCCATATCTATGGTTCGAACGAGTTGGAGAAGCACGAGAACCAATCCATTTGGAGCCTCGTTCTTGATCAGTTCAACGACACTTTGGTTCGGATCCTCCTCGTCGCCGCCATCGTTTCCTTCGTCCTCGCCTGGCTCGACGGCGATGAAGGTGGCGACATGGAAATAACCGCCTTCGTGGAGCCTCTCGTGATATTCCTCATCCTGATCGTCAACGCCATCGTCGGCGTTTGGCAGGAGAGCAATGCCGAGAAGGCACTCGAAGCGCTGAAGGAGATTCAGTCGGAGCACGCCGCCGTCGTTCGCGGCGGAAAGTTGATCCCAAATTTACCGGCGAAGGATCTCGTCCCCGGCGATGTGGTGGAGCTTAAGGTCGGAGATAAGGTCCCTGCTGATATGCGTGTTGCGGAGTTGGTTAGTTCTACTCTGCGGTTGGAACAGGGCTCACTCACTGGAGAGAGTGAAGCGGTGATTAAGACCTACAAGGCTGTTGCTGAAGACGCTGATATTCTAGGCAAGAAGTGTATGCTTTTCGCAGGGACCACTGTTGTTAACGGACATTGCCTCTGTTTTGTTACTCACACAGGAATGGAAACAGAGATTGGTAAAGTGCATAAGCAGATACACGTGGCGGCGCTGAATGAGGAAGAAACGCCGTTGAAGAAGAAGCTGAATGAGTTTGGAGAGATGTTAACACTGATAATTGGAGTTGTGTGTGCTTTGGTGTGGCTCATCAATGTGAAGTATTTTCTCACCTGGGAATACGAGGGTGGGTGGCCGAGGAACTTCAAGTTTTCGTTTGAGAAGTGCACGTATTACTTTGAGATTGCTGTGGCATTGGCAGTGGCTGCGATCCCTGAAGGTTTGCCTGCGGTTATCACTGCTTGCTTGGCGCTAGGTACTCGCAAGATGGCTCAGAAGAATGCACTTGTTCGGAAGCTAACAAGTGTGGAAACTCTGGGTTGTACCACTGTGATTTGTTCGGATAAAACGGGGACGTTGACTACGAATCAGATGGCGGTGACGAAAATTGTGGCTGTTGGTGATAATGTAGATGCTCTGCAATTCTTTAAGGTGGAAGGGACTACTTACAATCCATCTGATGGTAAAATAGAGGACTGGCCAACGGGTCCATTGGATGCTAATCTTGAGATGATAGCCAAAATATGTGCCGTTTGTAATGATGCAGGGATTACAGAGTCAGAGCAAAAGTTTGTGGCCCATGGAATTCCCACTGAAGCAGCCTTAAAGGTTCTGGTGGAGAAGATGGGCCTTCCTGAAGGAAAGGATGCATTTTCAGCAAATGGAAGCACCTTATTACGTTGTTGTGAATGGTGGAATGAACATGATCCTCGGATTGCTACTCTTGAGTTTGACCATGATAGGAAGTCAATGGGTGTTATTGTGGACTCTGGTCCAGGGAAAAGATCACTGCTGGTTAAGGGTGCTGTAGAAAATGTGTTGGAACGAAGCTCTAAAATTCAGTTGTGTGACGGTTCTATTGTGAAACTGGACAATAATGGTAGGAACCGTGTTTTGCAAGCTCTTCATGAAATGTCAACTGGTGCATTACGCTGTTTGGGATTTGCCTACAAGGATGAGCTCCCAATGTTTGAAAGCTACCGTGGTAATGATGATCATCCAGCTCACCAGCTTTTGCTTAATCCTTCCAACTATTCATCAATTGAAAGTGAACTTATTTTTGTTGGTTTTGTTGGATTAAGGGATCCTCCTAGGGAAGAGGTATACCAAGCAATTGAGGACTGCAGAGCAGCTGGAATTCGTGTTTTGGTTATTACTGGAGACAACAAGGACACAGCAGAAGCTATATGCCGTGAAATAGGTGTATTTCGACCCAATGAAGACATTAGTTTAAGAAGCATAACAGGAAAAGAGTTTATGGAACTGCATGATAAAAAAACCCATCTGGCTCAAAATGGTGGGCTTTTGTTTTCAAGGGCTGAACCTAGGCACAAGCAAGAAATTGTGCGGCTGCTCAAAGAGAATGGAGAGGTGGTGGCCATGACTGGAGATGGTGTTAATGATGCACCTGCCTTGAAGCTTGCTGATATTGGCATTGCAATGGGCATTACTGGGACTGAGGTGGCAAAGGAAGCTTCGGATATGGTCTTGGCTGATGATAATTTTAGTACAATTGTTGCTGCTGTTGGTGAAGGTAGATCTATCTACAATAACATGAAGGCTTTTATCAGGTATATGATCTCTTCCAATATTGGCGAGGTTGCTTCTATATTTCTAACGGCAGCCCTAGGTATTCCTGAAGGATTGCTACCTGTTCAGCTTCTTTGGGTCAATCTTGTTACAGATGGACCCCCCGCAACAGCTTTGGGATTTAATCCTCCAGATAAGGATATAATGAAGAAGCCTCCTCGTCGCAGTGATGACTCACTAATTAACTTGTGGATTTTATTCCGCTATCTGGTTATTGGCATGTATGTTGGATTAGCTACAGTTGGTGTCTTTATTATATGGTATACCCATGGTTCCTTCTTGGGTATTAACCTTAGCGGGGATGGCCATACTCTTGTCACTTACTCCCAACTTAGCAACTGGGGTCAATGCTCCACATGGAATAATTTCACTGCTTCTCCCTTCACTGCTGGTGCTAGAGTTTTCTCTTTTGATAATGACCCCTGTGAATATTTCCAGGCTGGAAAGGTGAAAGCTATGACTCTCTCCCTCTCTGTGTTGGTAGCCATAGAAATGTTCAATTCTCTCAATGCCCTTTCTGAGGATGGAAGCCTTTTGACAATGCCTCCTTGGGTCAACCCTTGGCTTCTTTTGGCAATGTCCGTGTCATTTGGTCTTCACTTTTTGATCTTGTATGTGCCATTCTTAGCCCAAGTATTTGGCATTGTGCCCCTCAGCTTCAATGAATGGCTTTTGGTTTTGGTTGTTGCACTCCCTGTTGTTATAATTGACGAGATTCTGAAACTTGTGGGGAGGTGTACAAGTACAAGTAGGTCTCAAACATCTCCGACAAAAGCAAAGCAAAAATCAGAGTAG 3180 0.4588 MGKGSQNCEKPENSHSEREIFKAWSRNVSECEEHFKVSLKTGLSSHQVENRRHIYGSNELEKHENQSIWSLVLDQFNDTLVRILLVAAIVSFVLAWLDGDEGGDMEITAFVEPLVIFLILIVNAIVGVWQESNAEKALEALKEIQSEHAAVVRGGKLIPNLPAKDLVPGDVVELKVGDKVPADMRVAELVSSTLRLEQGSLTGESEAVIKTYKAVAEDADILGKKCMLFAGTTVVNGHCLCFVTHTGMETEIGKVHKQIHVAALNEEETPLKKKLNEFGEMLTLIIGVVCALVWLINVKYFLTWEYEGGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITACLALGTRKMAQKNALVRKLTSVETLGCTTVICSDKTGTLTTNQMAVTKIVAVGDNVDALQFFKVEGTTYNPSDGKIEDWPTGPLDANLEMIAKICAVCNDAGITESEQKFVAHGIPTEAALKVLVEKMGLPEGKDAFSANGSTLLRCCEWWNEHDPRIATLEFDHDRKSMGVIVDSGPGKRSLLVKGAVENVLERSSKIQLCDGSIVKLDNNGRNRVLQALHEMSTGALRCLGFAYKDELPMFESYRGNDDHPAHQLLLNPSNYSSIESELIFVGFVGLRDPPREEVYQAIEDCRAAGIRVLVITGDNKDTAEAICREIGVFRPNEDISLRSITGKEFMELHDKKTHLAQNGGLLFSRAEPRHKQEIVRLLKENGEVVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYNNMKAFIRYMISSNIGEVASIFLTAALGIPEGLLPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLINLWILFRYLVIGMYVGLATVGVFIIWYTHGSFLGINLSGDGHTLVTYSQLSNWGQCSTWNNFTASPFTAGARVFSFDNDPCEYFQAGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQVFGIVPLSFNEWLLVLVVALPVVIIDEILKLVGRCTSTSRSQTSPTKAKQKSE. 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05664 1059 SUPERFAMILY Calcium ATPase, transduction domain A 148 258 IPR008250 -
Seca7g05664 1059 SMART Cation_ATPase_N_a_2 22 96 IPR004014 -
Seca7g05664 1059 FunFam Calcium-transporting P-type ATPase, putative 623 772 - -
Seca7g05664 1059 SFLD p-type atpase 359 779 IPR044492 -
Seca7g05664 1059 Pfam Cation transporter/ATPase, N-terminus 24 91 IPR004014 -
Seca7g05664 1059 FunFam ECA1 (ER-TYPE CA2+-ATPASE 1) 791 1045 - -
Seca7g05664 1059 Pfam Cation transporting ATPase, C-terminus 812 1038 IPR006068 -
Seca7g05664 1059 Gene3D - 388 628 IPR023299 GO:0000166
Seca7g05664 1059 Gene3D - 41 262 - -
Seca7g05664 1059 FunFam calcium-transporting ATPase, endoplasmic reticulum-type 388 628 - -
Seca7g05664 1059 Gene3D - 74 1040 - -
Seca7g05664 1059 PRINTS P-type cation-transporting ATPase superfamily signature 621 632 - -
Seca7g05664 1059 PRINTS P-type cation-transporting ATPase superfamily signature 197 211 - -
Seca7g05664 1059 PRINTS P-type cation-transporting ATPase superfamily signature 378 392 - -
Seca7g05664 1059 PRINTS P-type cation-transporting ATPase superfamily signature 643 653 - -
Seca7g05664 1059 PRINTS P-type cation-transporting ATPase superfamily signature 727 746 - -
Seca7g05664 1059 PRINTS P-type cation-transporting ATPase superfamily signature 751 763 - -
Seca7g05664 1059 FunFam Calcium-transporting ATPase, putative 124 260 - -
Seca7g05664 1059 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 249 405 - -
Seca7g05664 1059 NCBIfam HAD-IC family P-type ATPase 115 305 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Seca7g05664 1059 NCBIfam HAD-IC family P-type ATPase 701 808 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Seca7g05664 1059 NCBIfam HAD-IC family P-type ATPase 317 399 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Seca7g05664 1059 SFLD C1.7: P-type atpase like 359 779 - -
Seca7g05664 1059 ProSitePatterns E1-E2 ATPases phosphorylation site. 380 386 IPR018303 -
Seca7g05664 1059 PANTHER CALCIUM-TRANSPORTING ATPASE 24 1048 - -
Seca7g05664 1059 Pfam E1-E2 ATPase 144 358 - -
Seca7g05664 1059 SUPERFAMILY HAD-like 376 831 IPR036412 -
Seca7g05664 1059 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 385 625 IPR023299 GO:0000166
Seca7g05664 1059 Gene3D - 375 772 IPR023214 -
Seca7g05664 1059 Pfam haloacid dehalogenase-like hydrolase 375 741 - -
Seca7g05664 1059 SUPERFAMILY Calcium ATPase, transmembrane domain M 23 1041 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05664 Seca-Chr7 155817973 155823792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05664 1 1059 Primary Pumps ATPases(2) AT1G07670 76.836 0.0 1683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05664 K01537 - gmx:100812151 1800.41