Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05647 ATGGCAACTCTAGCCGCAGTTCGTCCTCCCCCGTTAACTTCCACTTCCGACCCACCTCCTCTCTTTGACGGAACTACCAGGTTGTACATCAATTACGCTTGCCCTTATGCACTAGGAACTACAATTTTGTATCATGTACAGGGGCTACAAGACAAGATCCAATTGGTTCCTATCGACCTTCAAAACAGGCCTGCTTGGTATAAGGAGAAACTCTACCCTGAAAATAAGGTTCCATCCTTGGAGCACAATGGCAAGGTATTGGGGGAAAGTCTTGATCTGATCAAATATGTAGATGCCAACTTAGAAGGGACACCTCTGCTTCCAAGTGATCCTGCCAAGAAAGAGTTCGGTGAGCAACTGTTATCCCATGTTGATACATTCACCAGAGACCTGTTTGTTTCATTGAAAGGAGATGCTGTACAACAAGCCAGTCCTGCTTTTGAATACTTGGAGAATGCTCTTGGTAGATTTGATGATGGGCCATTCCTGCTTGGTCAATTTAGTTTGGTGGATATTGCTTATATTCCGTTTGTTGAAAGATTCAATATTGTATTTGCTGAGGTGTTCAAACATGACATCACGGAAGGAAGGCCTAAACTTAAAGCATGGATTGAGGAGTTGAACAAGATTGGTGCTTATACGGAGACAAGAGTCGATCCTCAGGAAATAGTTGATCTTTTCAAGAAACGTTTTCTGCCTCAACAGTAA 708 0.4308 MATLAAVRPPPLTSTSDPPPLFDGTTRLYINYACPYALGTTILYHVQGLQDKIQLVPIDLQNRPAWYKEKLYPENKVPSLEHNGKVLGESLDLIKYVDANLEGTPLLPSDPAKKEFGEQLLSHVDTFTRDLFVSLKGDAVQQASPAFEYLENALGRFDDGPFLLGQFSLVDIAYIPFVERFNIVFAEVFKHDITEGRPKLKAWIEELNKIGAYTETRVDPQEIVDLFKKRFLPQQ. 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05647 235 PANTHER GLUTATHIONE S-TRANSFERASE L1 5 231 IPR044629 GO:0004364
Seca7g05647 235 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 24 105 IPR004045 -
Seca7g05647 235 CDD GST_C_Lambda 110 228 - -
Seca7g05647 235 Gene3D - 103 234 - -
Seca7g05647 235 Pfam Glutathione S-transferase, N-terminal domain 28 103 IPR004045 -
Seca7g05647 235 FunFam Glutathione S-transferase L2, chloroplastic 1 102 - -
Seca7g05647 235 SUPERFAMILY Thioredoxin-like 18 105 IPR036249 -
Seca7g05647 235 SFLD Glutathione Transferase (cytosolic) 28 207 IPR040079 -
Seca7g05647 235 SUPERFAMILY GST C-terminal domain-like 102 231 IPR036282 -
Seca7g05647 235 Gene3D Glutaredoxin 1 102 - -
Seca7g05647 235 FunFam Lambda class glutathione S-transferase 103 234 - -
Seca7g05647 235 Pfam Glutathione S-transferase, C-terminal domain 139 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05647 Seca-Chr7 155678768 155681076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05647 8 232 Glutathione S-transferase Gene Family AT5G02790 64.000 2.00e-109 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05647 K00799 - gmx:547597 405.216