Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g05641 | ATGGGTTGGATTCCGTGTTCTGGAACTTCAAACACTAAGAAGAAGAACAAGTTTGAGAAGATGGAAGTGCAGAACAGCCTGGTTGATCCGATCAAAGCCACCCCAGGGAAATTGAAGAGGAATTCATCCATGAATTCCAATGATTCCTCTAAAAATGGAAATCCTGATCACATTGCTGCACAGACATTCACATTCCGTGAGTTGGCAACTGCAACTAGAAATTTTAGAGCAGAATGTCTTTTGGGCGAGGGAGGCTTTGGCAGAGTATACAAAGGGCGTTTGGAAAATATTAATCAGATTGTTGCGATTAAGCAACTTGACCGGAATGGGCTGCAAGGGAATAGAGAATTCCTTGTTGAAGTGTTGATGTTAAGTCTTCTTCACCATCCTAACCTTGTCAATCTGATTGGTTATTGTGCTGATGGAGATCAAAGGCTTCTAGTTTATGAATACATGTCATTAGGATCCTTGGAAGACCACTTACATGGTATCAAGAAGCGACTTGATTGGAACACAAGAATGAAAATAGCTGCTGGGGCAGCAAAGGGATTGGAGTATCTACATGATAAAGCTAACCCTCCTGTCATATATCGAGATTTAAAGTGCTCAAACATTTTGCTAGGTGAAGGGTATCATCCAAAGTTATCTGATTTTGGTTTGGCTAAACTTGGTCCAGTGGGGGAGAACACCCATGTATCAACAAGGGTTATGGGCACCTATGGATATTGTGCACCAGAGTATGCAATGACAGGTCAACTGACTCTGAAATCAGATGTTTATAGCTTTGGTGTAGTTCTTCTGGAAATAATTACTGGAAGAAAAGCTATTGACAATTCAAAATCTGCAGGAGAGCAGAATCTTGTTGCGTGGGTAAGACACTTGGCTAGACCCTTGTTTAAAGATCGAAGAAAATTTTCACAAATGGCTGATCCAATGCTCCAAGGTCAATATCCTCCCAGAGGGATATACCAGGCCCTTGCTGTTGCAGCAATGTGTGTTCAGGAGCAGGCTAATATGCGTCCAGTTATAGCTGATGTAGTCACAGCTTTGAGTTACCTTGCTTCACAAAGATATGACCCCAATACACAGACAGTACAAAGCTATCGCCTTCCTCCTGGCACTCCTCCTAGAAACAAGAGGGGACAGTGA | 1149 | 0.4238 | MGWIPCSGTSNTKKKNKFEKMEVQNSLVDPIKATPGKLKRNSSMNSNDSSKNGNPDHIAAQTFTFRELATATRNFRAECLLGEGGFGRVYKGRLENINQIVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMSLGSLEDHLHGIKKRLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKSAGEQNLVAWVRHLARPLFKDRRKFSQMADPMLQGQYPPRGIYQALAVAAMCVQEQANMRPVIADVVTALSYLASQRYDPNTQTVQSYRLPPGTPPRNKRGQ. | 383 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g05641 | 382 | MobiDBLite | consensus disorder prediction | 363 | 382 | - | - | |
Seca7g05641 | 382 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 195 | 207 | IPR008271 | GO:0004672|GO:0006468 | |
Seca7g05641 | 382 | MobiDBLite | consensus disorder prediction | 38 | 56 | - | - | |
Seca7g05641 | 382 | FunFam | Serine/threonine-protein kinase PBS1 | 152 | 368 | - | - | |
Seca7g05641 | 382 | ProSitePatterns | Protein kinases ATP-binding region signature. | 81 | 104 | IPR017441 | GO:0005524 | |
Seca7g05641 | 382 | Gene3D | Phosphorylase Kinase; domain 1 | 45 | 151 | - | - | |
Seca7g05641 | 382 | SMART | serkin_6 | 75 | 353 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g05641 | 382 | Gene3D | Transferase(Phosphotransferase) domain 1 | 152 | 369 | - | - | |
Seca7g05641 | 382 | FunFam | Serine/threonine-protein kinase PBS1 | 47 | 151 | - | - | |
Seca7g05641 | 382 | CDD | STKc_IRAK | 81 | 350 | - | - | |
Seca7g05641 | 382 | SUPERFAMILY | Protein kinase-like (PK-like) | 61 | 369 | IPR011009 | - | |
Seca7g05641 | 382 | ProSiteProfiles | Protein kinase domain profile. | 75 | 353 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g05641 | 382 | PANTHER | OS07G0668900 PROTEIN | 22 | 362 | - | - | |
Seca7g05641 | 382 | Pfam | Protein tyrosine and serine/threonine kinase | 79 | 347 | IPR001245 | GO:0004672|GO:0006468 | |
Seca7g05641 | 382 | MobiDBLite | consensus disorder prediction | 29 | 56 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g05641 | Seca-Chr7 | 155630085 | 155633684 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g05641 | 29 | 372 | Glycoside Hydrolase | AT3G07070 | 64.368 | 1.41e-159 | 452 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-1 | Seca7g05641 | PK_Tyr_Ser-Thr | 9.7e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g05641 | - | - | gmx:100776041 | 708.368 |