Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05627 ATGGAGACTAGGCTACCCTTCTTCTTCTTGTCCTCTCTCTCACTCTTGCTGTTACTCCTCTTGCCTCTTTCCTCTTCTCAGATGCCAGGTTTTGTAAGTTTGGACTGTGGAGGTAAAGAAAATTTCACTGATGAAATTGGTCTTAAATGGACTCCTGATGATAAAATTACTTATGGAGAAATAAGCACTATTTTGGTTGCCAACGAGACGCGGAAGCAATACACCACACTACGACATTTTCCTGCTGATTCCAGAAAATACTGCTACACACTTAATGTTGTCAGTAGAACAAGGTACCTACTGAGGGCAACATTTTTGTATGGGAACTTTGATAGCAACAATGTTTATCCAAAATTTGACATATCTGTCGGGGCTACTCATTGGTCTACTATTGTCATATCTGATGCTAACACTATAGAAGTGAGAGAGCTTATATTTTTAGCTTCAAGTCCTACAGTTAGTGTATGTTTATCAAATGCAACAACTGGGAAGCCATTCATATCTACGCTTGAACTCCGGCAATTCAATGGTTCGGTTTATTATACATACTATGAGGATCAGTTTTACCTCAGTGTCTCTGCAAGGATAAATTTTGGTGCAGAGAGTGATGCCCCAATCAGGTATCCTGATGATCCATTTGATAGAATTTGGGAATCAGATTCTGTTAAGAAAGCAAATTATCTCGTTGATGTTGCTGCTGGAACTAAGAAAATTTCTACCAAAGTACCAATTGATGTTAACAGAGATGAAATGCCACCTGTGAAAGTAATGCAGACAGCGGTAGTGGGTACAAATGGATCTCTAACTTACCGGTTGAACTTGGATGGTTTTCCTGGTATTGGATGGGCATTCAGCTATCTTGCAGAGATTGAAGATTTGGCTCAAAATGAAACTAGAAAATTCAGGCTTGTACTTCCGGGCCAGCCTGATGTTAGTAAGGCTGTGGTAAATATTGAAGAAAATGCCCCAGGAAAATATCGCCTTTATGAACCAGGATTCAACAACTTATCCCTACCCTTTGTGCTGTCCTTTAGATTTGGCAAAACATCTGATTCTTCCAGGGGCCCTCTTCTAAATGCCATGGAGATTAACAAGTATCTGGAGAAAAATGATGGCTCTCCTGATGGTGAAGCTATATCTAGTGTACTTTCACACTACTCTTCAGCAGATTGGGCACAAGAAGGGGGTGACCCATGTTTACCTGTTCCATGGTCATGGGTCCGCTGTAGCTCAGATCAACAGCCAAGAATAGTTTCAATTTTGTTGTCTAATAAAAACTTGACGGGCAATATTCCTTTGGACATCACCAAATTGACTGGTCTGGTTGAATTATGGCTTGATGGAAATATGCTGACTGGTCCAATACCAGATTTTACTAGATGCATGGACTTGAAGATCATTCATCTTGAGAACAATCAGTTGACGGGTGCGCTCCCAACCTCTTTGGTGAACCTTCCTAATTTGAGGGAACTGTATGTCCAAAATAATATGTTATCTGGAACTGTGCCATCAGGTCTTCTGAGCAAAGATTTGGTTTTGAACTACTCTGGAAACATTAATCTCCATAAAGGAAGCAGAAAAACGAGCCACGTGTATGTGATTATTGGTTCAGCAGTTGGGGCTGCCGTTTTACTTTTGGCTACTATTGTGTCTTGCTTGTTCATGCATAAAGGAAAGAGAAGATATTATGAGCAAGACAACCTTATTTCTCTACCGTCTCAAAGTCTGGATTCTAAGAGCGATGGTCCTGCAGAAGCTGCTCACTGCTTCAGTTATGCTGAAATTGAAAATTCTACAAATAATTTTGAGAAAAAAATTGGTTCTGGAGGATTTGGAGTTGTTTACTATGGGAAACTGAAAGATGGAAAAGAGATAGCAGTTAAAGTTCTAACCAGTAATTCCTATCAAGGCAAACGAGAGTTCTCCAATGAGGTATCTCTTCTTTCAAGAATACATCACAGAAACTTGGTACAGCTTCTTGGGTATTGCCGAGAGGAAGGGAATAGTTTGCTTATTTATGAGTTCATGCACAATGGAACTCTCAAGGAACATCTTTATGGCCCATTAACGCATGGACGCAGTATCAATTGGATTAAGCGCCTTGAGATTGCAGAAGATTCTGCCAAAGGGATTGAATATCTTCACACAGGCTGTGTTCCTGCAGTTATCCATAGAGACTTGAAAAGCAGCAACATTCTTCTTGACAAGCACATGAGAGCCAAGGTTTCAGATTTTGGTCTTTCAAAACTTGCAGTTGATGGAGTCTCTCATGTCTCTAGCATAGTTCGGGGGACAGTTGGATACCTGGATCCTGAGTACTATATTTCCCAGCAGCTGACTGACAAGAGTGATATTTATAGTTTTGGCGTAATTCTTCTTGAACTCATATCTGGTCAAGAAGCAATATCTAATGACAGCTTTGGTGCTAATTGCCGAAACATAGTCCAGTGGGCAAAATTACACATTGAGAGTGGAGATATACAAGGAATCATAGATCCGGCGCTAGGAAACGAGTATGACCTACAATCAATGTGGAAAATAGCAGAGAAAGCATTGATGTGCGTTCAACCTCATGGACATATGCGGCCATCAATTTCAGAGGTTCTGAAGGAGATCCAAGATGCAATCGCTATTGAGAGAGAGGCCGAAGCCAATTCGCCTAGAAATTCCGTTCACTCTTCCATCAATATGGGTTCTATGGATCTCGCTGCAACCGAAAATTACCTCTCAATTGATGAATCCATTGCACAGCCTACTGCACGATAG 2766 0.4082 METRLPFFFLSSLSLLLLLLLPLSSSQMPGFVSLDCGGKENFTDEIGLKWTPDDKITYGEISTILVANETRKQYTTLRHFPADSRKYCYTLNVVSRTRYLLRATFLYGNFDSNNVYPKFDISVGATHWSTIVISDANTIEVRELIFLASSPTVSVCLSNATTGKPFISTLELRQFNGSVYYTYYEDQFYLSVSARINFGAESDAPIRYPDDPFDRIWESDSVKKANYLVDVAAGTKKISTKVPIDVNRDEMPPVKVMQTAVVGTNGSLTYRLNLDGFPGIGWAFSYLAEIEDLAQNETRKFRLVLPGQPDVSKAVVNIEENAPGKYRLYEPGFNNLSLPFVLSFRFGKTSDSSRGPLLNAMEINKYLEKNDGSPDGEAISSVLSHYSSADWAQEGGDPCLPVPWSWVRCSSDQQPRIVSILLSNKNLTGNIPLDITKLTGLVELWLDGNMLTGPIPDFTRCMDLKIIHLENNQLTGALPTSLVNLPNLRELYVQNNMLSGTVPSGLLSKDLVLNYSGNINLHKGSRKTSHVYVIIGSAVGAAVLLLATIVSCLFMHKGKRRYYEQDNLISLPSQSLDSKSDGPAEAAHCFSYAEIENSTNNFEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFSNEVSLLSRIHHRNLVQLLGYCREEGNSLLIYEFMHNGTLKEHLYGPLTHGRSINWIKRLEIAEDSAKGIEYLHTGCVPAVIHRDLKSSNILLDKHMRAKVSDFGLSKLAVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDIYSFGVILLELISGQEAISNDSFGANCRNIVQWAKLHIESGDIQGIIDPALGNEYDLQSMWKIAEKALMCVQPHGHMRPSISEVLKEIQDAIAIEREAEANSPRNSVHSSINMGSMDLAATENYLSIDESIAQPTAR. 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05627 921 FunFam Leucine-rich repeat receptor-like protein kinase 577 675 - -
Seca7g05627 921 Gene3D Ribonuclease Inhibitor 377 529 IPR032675 -
Seca7g05627 921 Gene3D Phosphorylase Kinase; domain 1 574 675 - -
Seca7g05627 921 ProSiteProfiles Protein kinase domain profile. 600 876 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g05627 921 ProSitePatterns Protein kinases ATP-binding region signature. 606 628 IPR017441 GO:0005524
Seca7g05627 921 SUPERFAMILY L domain-like 402 509 - -
Seca7g05627 921 FunFam Leucine-rich repeat protein kinase family protein 377 527 - -
Seca7g05627 921 Pfam Malectin-like domain 34 364 IPR024788 -
Seca7g05627 921 PANTHER OS07G0107800 PROTEIN-RELATED 462 876 - -
Seca7g05627 921 SUPERFAMILY Protein kinase-like (PK-like) 586 880 IPR011009 -
Seca7g05627 921 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 676 885 - -
Seca7g05627 921 SMART serkin_6 600 876 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g05627 921 ProSitePatterns Serine/Threonine protein kinases active-site signature. 722 734 IPR008271 GO:0004672|GO:0006468
Seca7g05627 921 CDD STKc_IRAK 606 873 - -
Seca7g05627 921 Pfam Protein tyrosine and serine/threonine kinase 602 802 IPR001245 GO:0004672|GO:0006468
Seca7g05627 921 Gene3D Transferase(Phosphotransferase) domain 1 676 896 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05627 Seca-Chr7 155452321 155459300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05627 24 710 Receptor kinase-like Gene Family AT2G37050 69.209 0.0 1011
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Seca7g05627 Malectin_like 7.3e-76 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05627 - - gmx:100798007 1642.86